3.1.1.1	carboxylesterase	-	
3.1.1.2	arylesterase	-	
3.1.1.3	triacylglycerol lipase	-	
3.1.1.4	phospholipase A2	-	
3.1.1.5	lysophospholipase	-	
3.1.1.6	acetylesterase	-	
3.1.1.7	acetylcholinesterase	-	
3.1.1.8	cholinesterase	-	
3.1.1.9	benzoylcholinesterase	deleted	
3.1.1.10	tropinesterase	-	
3.1.1.B10	p-coumaroyl esterase	preliminary BRENDA-supplied EC number	
3.1.1.11	pectinesterase	-	
3.1.1.B11	glucuronoyl esterase	deleted, replaced by EC 3.1.1.117	
3.1.1.12	vitamin A esterase	deleted	
3.1.1.B12	zearalenone hydrolase	preliminary BRENDA-supplied EC number	
3.1.1.13	sterol esterase	-	
3.1.1.B13	ergosteryl-3beta-O-L-aspartate hydrolase	preliminary BRENDA-supplied EC number	
3.1.1.14	chlorophyllase	-	
3.1.1.15	L-arabinonolactonase	-	
3.1.1.16	4-carboxymethyl-4-hydroxyisocrotonolactonase	deleted, reaction is that of EC 5.3.3.4 and EC 3.1.1.24	
3.1.1.17	gluconolactonase	-	
3.1.1.18	aldonolactonase	deleted, included in EC 3.1.1.17	
3.1.1.19	uronolactonase	-	
3.1.1.20	tannase	-	
3.1.1.21	retinyl-palmitate esterase	deleted, now covered by EC 3.1.1.1, carboxylesterase and EC 3.1.1.3, triacylglycerol lipase	
3.1.1.22	hydroxybutyrate-dimer hydrolase	-	
3.1.1.23	acylglycerol lipase	-	
3.1.1.24	3-oxoadipate enol-lactonase	-	
3.1.1.25	1,4-lactonase	-	
3.1.1.26	galactolipase	-	
3.1.1.27	4-pyridoxolactonase	-	
3.1.1.28	acylcarnitine hydrolase	-	
3.1.1.29	aminoacyl-tRNA hydrolase	-	
3.1.1.30	D-arabinonolactonase	-	
3.1.1.31	6-phosphogluconolactonase	-	
3.1.1.32	phospholipase A1	-	
3.1.1.33	6-acetylglucose deacetylase	-	
3.1.1.34	lipoprotein lipase	-	
3.1.1.35	dihydrocoumarin hydrolase	-	
3.1.1.36	limonin-D-ring-lactonase	-	
3.1.1.37	steroid-lactonase	-	
3.1.1.38	triacetate-lactonase	-	
3.1.1.39	actinomycin lactonase	-	
3.1.1.40	orsellinate-depside hydrolase	-	
3.1.1.41	cephalosporin-C deacetylase	-	
3.1.1.42	chlorogenate hydrolase	-	
3.1.1.43	alpha-amino-acid esterase	-	
3.1.1.44	4-methyloxaloacetate esterase	-	
3.1.1.45	carboxymethylenebutenolidase	-	
3.1.1.46	Deoxylimonate A-ring-lactonase	-	
3.1.1.47	1-alkyl-2-acetylglycerophosphocholine esterase	-	
3.1.1.48	fusarinine-C ornithinesterase	-	
3.1.1.49	sinapine esterase	-	
3.1.1.50	wax-ester hydrolase	-	
3.1.1.51	phorbol-diester hydrolase	-	
3.1.1.52	phosphatidylinositol deacylase	-	
3.1.1.53	sialate O-acetylesterase	-	
3.1.1.54	acetoxybutynylbithiophene deacetylase	-	
3.1.1.55	acetylsalicylate deacetylase	-	
3.1.1.56	methylumbelliferyl-acetate deacetylase	-	
3.1.1.57	2-pyrone-4,6-dicarboxylate lactonase	-	
3.1.1.58	N-acetylgalactosaminoglycan deacetylase	-	
3.1.1.59	juvenile-hormone esterase	-	
3.1.1.60	bis(2-ethylhexyl)phthalate esterase	-	
3.1.1.61	protein-glutamate methylesterase	-	
3.1.1.62	N-acetyldiaminopimelate deacylase	transferred to EC 3.5.1.47	
3.1.1.63	11-cis-retinyl-palmitate hydrolase	-	
3.1.1.64	retinoid isomerohydrolase	-	
3.1.1.65	L-rhamnono-1,4-lactonase	-	
3.1.1.66	5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene deacetylase	-	
3.1.1.67	fatty-acyl-ethyl-ester synthase	-	
3.1.1.68	xylono-1,4-lactonase	-	
3.1.1.69	N-acetylglucosaminylphosphatidylinositol deacetylase	transferred to EC 3.5.1.89	
3.1.1.70	cetraxate benzylesterase	-	
3.1.1.71	acetylalkylglycerol acetylhydrolase	-	
3.1.1.72	acetylxylan esterase	-	
3.1.1.73	feruloyl esterase	-	
3.1.1.74	cutinase	-	
3.1.1.75	poly(3-hydroxybutyrate) depolymerase	-	
3.1.1.76	poly(3-hydroxyoctanoate) depolymerase	-	
3.1.1.77	acyloxyacyl hydrolase	-	
3.1.1.78	polyneuridine-aldehyde esterase	-	
3.1.1.79	hormone-sensitive lipase	-	
3.1.1.80	acetylajmaline esterase	-	
3.1.1.81	quorum-quenching N-acyl-homoserine lactonase	-	
3.1.1.82	pheophorbidase	-	
3.1.1.83	monoterpene epsilon-lactone hydrolase	-	
3.1.1.84	cocaine esterase	-	
3.1.1.85	pimelyl-[acyl-carrier protein] methyl ester esterase	-	
3.1.1.86	rhamnogalacturonan acetylesterase	-	
3.1.1.87	fumonisin B1 esterase	-	
3.1.1.88	pyrethroid hydrolase	-	
3.1.1.89	protein phosphatase methylesterase-1	-	
3.1.1.90	all-trans-retinyl ester 13-cis isomerohydrolase	-	
3.1.1.91	2-oxo-3-(5-oxofuran-2-ylidene)propanoate lactonase	-	
3.1.1.92	4-sulfomuconolactone hydrolase	-	
3.1.1.93	mycophenolic acid acyl-glucuronide esterase	-	
3.1.1.94	versiconal hemiacetal acetate esterase	-	
3.1.1.95	aclacinomycin methylesterase	-	
3.1.1.96	D-aminoacyl-tRNA deacylase	-	
3.1.1.97	methylated diphthine methylhydrolase	-	
3.1.1.98	[Wnt protein] O-palmitoleoyl-L-serine hydrolase	-	
3.1.1.99	6-deoxy-6-sulfogluconolactonase	-	
3.1.1.100	chlorophyllide a hydrolase	-	
3.1.1.101	poly(ethylene terephthalate) hydrolase	-	
3.1.1.102	mono(ethylene terephthalate) hydrolase	-	
3.1.1.103	teichoic acid D-alanine hydrolase	-	
3.1.1.104	5-phospho-D-xylono-1,4-lactonase	-	
3.1.1.105	3-O-acetylpapaveroxine carboxylesterase	-	
3.1.1.106	O-acetyl-ADP-ribose deacetylase	-	
3.1.1.107	apo-salmochelin esterase	-	
3.1.1.108	iron(III)-enterobactin esterase	-	
3.1.1.109	iron(III)-salmochelin esterase	-	
3.1.1.110	xylono-1,5-lactonase	-	
3.1.1.111	phosphatidylserine sn-1 acylhydrolase	-	
3.1.1.112	isoamyl acetate esteras	-	
3.1.1.113	ethyl acetate hydrolase	-	
3.1.1.114	methyl acetate hydrolase	-	
3.1.1.115	D-apionolactonase	-	
3.1.1.116	sn-1-specific diacylglycerol lipase	-	
3.1.1.117	(4-O-methyl)-D-glucuronate---lignin esterase	-	
3.1.1.118	phospholipid sn-1 acylhydrolase	-	
3.1.2.1	acetyl-CoA hydrolase	-	
3.1.2.2	palmitoyl-CoA hydrolase	-	
3.1.2.3	succinyl-CoA hydrolase	-	
3.1.2.4	3-hydroxyisobutyryl-CoA hydrolase	-	
3.1.2.5	hydroxymethylglutaryl-CoA hydrolase	-	
3.1.2.B5	3,4-hydroxyphenylacetyl-CoA thioesterase	preliminary BRENDA-supplied EC number	
3.1.2.6	hydroxyacylglutathione hydrolase	-	
3.1.2.7	glutathione thiolesterase	-	
3.1.2.8	S-acetoacylglutathione hydrolase	deleted, included in EC 3.1.2.6	
3.1.2.9	S-acetoacetylhydrolipoate hydrolase	deleted	
3.1.2.10	formyl-CoA hydrolase	-	
3.1.2.11	acetoacetyl-CoA hydrolase	-	
3.1.2.12	S-formylglutathione hydrolase	-	
3.1.2.13	S-succinylglutathione hydrolase	-	
3.1.2.14	oleoyl-[acyl-carrier-protein] hydrolase	-	
3.1.2.15	ubiquitin thiolesterase	deleted, activity due to EC 3.4.19.12, ubiquitinyl hydrolase 1	
3.1.2.16	citrate-lyase deacetylase	-	
3.1.2.17	(S)-methylmalonyl-CoA hydrolase	-	
3.1.2.18	ADP-dependent short-chain-acyl-CoA hydrolase	-	
3.1.2.19	ADP-dependent medium-chain-acyl-CoA hydrolase	-	
3.1.2.20	acyl-CoA hydrolase	-	
3.1.2.21	dodecanoyl-[acyl-carrier-protein] hydrolase	-	
3.1.2.22	palmitoyl[protein] hydrolase	-	
3.1.2.23	4-hydroxybenzoyl-CoA thioesterase	-	
3.1.2.24	2-(2-hydroxyphenyl)benzenesulfinate hydrolase	transferred to EC 3.13.1.3	
3.1.2.25	phenylacetyl-CoA hydrolase	-	
3.1.2.26	bile-acid-CoA hydrolase	transferred to EC 2.8.3.25	
3.1.2.27	choloyl-CoA hydrolase	-	
3.1.2.28	1,4-dihydroxy-2-naphthoyl-CoA hydrolase	-	
3.1.2.29	fluoroacetyl-CoA thioesterase	-	
3.1.2.30	(3S)-malyl-CoA thioesterase	-	
3.1.2.31	dihydromonacolin L-[lovastatin nonaketide synthase] thioesterase	-	
3.1.2.32	2-aminobenzoylacetyl-CoA thioesterase	-	
3.1.3.1	alkaline phosphatase	-	
3.1.3.2	acid phosphatase	-	
3.1.3.3	phosphoserine phosphatase	-	
3.1.3.4	phosphatidate phosphatase	-	
3.1.3.B4	phosphatidylinositol-4-phosphate phosphatase	preliminary BRENDA-supplied EC number	
3.1.3.5	5'-nucleotidase	-	
3.1.3.6	3'-nucleotidase	-	
3.1.3.7	3'(2'),5'-bisphosphate nucleotidase	-	
3.1.3.8	3-phytase	-	
3.1.3.B8	mannosylglucosyl-3-phosphoglycerate phosphatase	preliminary BRENDA-supplied EC number	
3.1.3.9	glucose-6-phosphatase	-	
3.1.3.B9	L-galactose 1-phosphate phosphatase	preliminary BRENDA-supplied EC number	
3.1.3.10	glucose-1-phosphatase	-	
3.1.3.11	fructose-bisphosphatase	-	
3.1.3.12	trehalose-phosphatase	-	
3.1.3.13	bisphosphoglycerate phosphatase	deleted, activity due to EC 5.4.2.11, phosphoglycerate mutase (2,3-diphosphoglycerate-dependent)
	
3.1.3.B13	sn-2-glycerol-3-phosphate phosphatase	preliminary BRENDA-supplied EC number	
3.1.3.14	methylphosphothioglycerate phosphatase	-	
3.1.3.B14	archaetidylinositol phosphate phosphatase	preliminary BRENDA-supplied EC number	
3.1.3.15	histidinol-phosphatase	-	
3.1.3.16	protein-serine/threonine phosphatase	-	
3.1.3.17	[phosphorylase] phosphatase	-	
3.1.3.18	phosphoglycolate phosphatase	-	
3.1.3.19	glycerol-2-phosphatase	-	
3.1.3.20	phosphoglycerate phosphatase	-	
3.1.3.21	glycerol-1-phosphatase	-	
3.1.3.22	mannitol-1-phosphatase	-	
3.1.3.23	sugar-phosphatase	-	
3.1.3.24	sucrose-phosphate phosphatase	-	
3.1.3.25	inositol-phosphate phosphatase	-	
3.1.3.26	4-phytase	-	
3.1.3.27	phosphatidylglycerophosphatase	-	
3.1.3.28	ADP-phosphoglycerate phosphatase	-	
3.1.3.29	N-acylneuraminate-9-phosphatase	-	
3.1.3.30	3'-phosphoadenylylsulfate 3'-phosphatase	deleted, included in EC 3.1.3.31	
3.1.3.31	nucleotidase	deleted. The activity may be that of an acid phosphatase.	
3.1.3.32	polynucleotide 3'-phosphatase	-	
3.1.3.33	polynucleotide 5'-phosphatase	-	
3.1.3.34	deoxynucleotide 3'-phosphatase	-	
3.1.3.35	thymidylate 5'-phosphatase	-	
3.1.3.36	phosphoinositide 5-phosphatase	-	
3.1.3.37	sedoheptulose-bisphosphatase	-	
3.1.3.38	3-phosphoglycerate phosphatase	-	
3.1.3.39	streptomycin-6-phosphatase	-	
3.1.3.40	guanidinodeoxy-scyllo-inositol-4-phosphatase	-	
3.1.3.41	4-nitrophenylphosphatase	-	
3.1.3.42	[glycogen-synthase-D] phosphatase	-	
3.1.3.43	[pyruvate dehydrogenase (acetyl-transferring)]-phosphatase	-	
3.1.3.44	[acetyl-CoA carboxylase]-phosphatase	-	
3.1.3.45	3-deoxy-manno-octulosonate-8-phosphatase	-	
3.1.3.46	fructose-2,6-bisphosphate 2-phosphatase	-	
3.1.3.47	[hydroxymethylglutaryl-CoA reductase (NADPH)]-phosphatase	-	
3.1.3.48	protein-tyrosine-phosphatase	-	
3.1.3.49	[pyruvate kinase]-phosphatase	-	
3.1.3.50	sorbitol-6-phosphatase	-	
3.1.3.51	dolichyl-phosphatase	-	
3.1.3.52	[3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)]-phosphatase	-	
3.1.3.53	[myosin-light-chain] phosphatase	-	
3.1.3.54	fructose-2,6-bisphosphate 6-phosphatase	-	
3.1.3.55	caldesmon-phosphatase	-	
3.1.3.56	inositol-polyphosphate 5-phosphatase	-	
3.1.3.57	inositol-1,4-bisphosphate 1-phosphatase	-	
3.1.3.58	sugar-terminal-phosphatase	-	
3.1.3.59	alkylacetylglycerophosphatase	-	
3.1.3.60	phosphoenolpyruvate phosphatase	-	
3.1.3.61	inositol-1,4,5-trisphosphate 1-phosphatase	deleted	
3.1.3.62	multiple inositol-polyphosphate phosphatase	-	
3.1.3.63	2-carboxy-D-arabinitol-1-phosphatase	-	
3.1.3.64	phosphatidylinositol-3-phosphatase	-	
3.1.3.65	inositol-1,3-bisphosphate 3-phosphatase	transferred to EC 3.1.3.64	
3.1.3.66	phosphatidylinositol-3,4-bisphosphate 4-phosphatase	-	
3.1.3.67	phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase	-	
3.1.3.68	2-deoxyglucose-6-phosphatase	-	
3.1.3.69	glucosylglycerol 3-phosphatase	-	
3.1.3.70	mannosyl-3-phosphoglycerate phosphatase	-	
3.1.3.71	2-phosphosulfolactate phosphatase	-	
3.1.3.72	5-phytase	-	
3.1.3.73	adenosylcobalamin/alpha-ribazole phosphatase	-	
3.1.3.74	pyridoxal phosphatase	-	
3.1.3.75	phosphoethanolamine/phosphocholine phosphatase	-	
3.1.3.76	lipid-phosphate phosphatase	-	
3.1.3.77	acireductone synthase	-	
3.1.3.78	phosphatidylinositol-4,5-bisphosphate 4-phosphatase	-	
3.1.3.79	mannosylfructose-phosphate phosphatase	-	
3.1.3.80	2,3-bisphosphoglycerate 3-phosphatase	-	
3.1.3.81	diacylglycerol diphosphate phosphatase	transferred. Now EC 3.6.1.75	
3.1.3.82	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-	
3.1.3.83	D-glycero-alpha-D-manno-heptose 1,7-bisphosphate 7-phosphatase	-	
3.1.3.84	ADP-ribose 1''-phosphate phosphatase	-	
3.1.3.85	glucosyl-3-phosphoglycerate phosphatase	-	
3.1.3.86	phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase	-	
3.1.3.87	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase	-	
3.1.3.88	5''-phosphoribostamycin phosphatase	-	
3.1.3.89	5'-deoxynucleotidase	-	
3.1.3.90	maltose 6'-phosphate phosphatase	-	
3.1.3.91	7-methylguanosine nucleotidase	-	
3.1.3.92	kanosamine-6-phosphate phosphatase	-	
3.1.3.93	L-galactose 1-phosphate phosphatase	-	
3.1.3.94	D-galactose 1-phosphate phosphatase	-	
3.1.3.95	phosphatidylinositol-3,5-bisphosphate 3-phosphatase	-	
3.1.3.96	pseudouridine 5'-phosphatase	-	
3.1.3.97	3',5'-nucleoside bisphosphate phosphatase	-	
3.1.3.98	CDP-glycerol:N-acetyl-beta-D-mannosaminyl-(1->4)-N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol glycerophosphotransferase	transferred to EC 3.6.1.68	
3.1.3.99	IMP-specific 5'-nucleotidase	-	
3.1.3.100	thiamine phosphate phosphatase	-	
3.1.3.101	validoxylamine A 7'-phosphate phosphatase	-	
3.1.3.102	FMN hydrolase	-	
3.1.3.103	3-deoxy-D-glycero-D-galacto-nonulopyranosonate 9-phosphatase	-	
3.1.3.104	5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase	-	
3.1.3.105	N-acetyl-D-muramate 6-phosphate phosphatase	-	
3.1.3.106	2-lysophosphatidate phosphatase	-	
3.1.3.107	amicoumacin phosphatase	-	
3.1.3.108	nocturnin	-	
3.1.4.1	phosphodiesterase I	-	
3.1.4.2	glycerophosphocholine phosphodiesterase	-	
3.1.4.3	phospholipase C	-	
3.1.4.4	phospholipase D	-	
3.1.4.B4	UDP-alpha-D-glucose glucohydrolase	preliminary BRENDA-supplied EC number	
3.1.4.5	deoxyribonuclease	transferred to EC 3.1.21.1	
3.1.4.6	deoxyribonuclease II	transferred to EC 3.1.22.1	
3.1.4.7	micrococcal nuclease	transferred to EC 3.1.31.1	
3.1.4.8	Aspergillus oryzae ribonuclease	transferred to EC 3.1.27.3	
3.1.4.9	nucleate endonuclease	transferred to EC 3.1.30.2	
3.1.4.10	1-phosphatidylinositol phosphodiesterase	transferred to EC 4.6.1.13	
3.1.4.11	phosphoinositide phospholipase C	-	
3.1.4.12	sphingomyelin phosphodiesterase	-	
3.1.4.13	serine-ethanolaminephosphate phosphodiesterase	-	
3.1.4.14	[acyl-carrier-protein] phosphodiesterase	-	
3.1.4.15	adenylyl-[glutamate-ammonia ligase] hydrolase	transferred to EC 2.7.7.89	
3.1.4.16	2',3'-cyclic-nucleotide 2'-phosphodiesterase	-	
3.1.4.17	3',5'-cyclic-nucleotide phosphodiesterase	-	
3.1.4.18	phosphodiesterase II	transferred to EC 3.1.16.1	
3.1.4.19	oligonucleotidase	transferred to EC 3.1.13.3	
3.1.4.20	exoribonuclease	transferred to EC 3.1.13.1	
3.1.4.21	single-stranded-nucleate endonuclease	transferred to EC 3.1.30.1	
3.1.4.22	ribonuclease I	transferred to EC 3.1.27.5	
3.1.4.23	ribonuclease II	transferred to EC 3.1.27.1	
3.1.4.24	endoribonuclease III	deleted	
3.1.4.25	exodeoxyribonuclease I	transferred to EC 3.1.11.1	
3.1.4.26	exodeoxyribonuclease II	deleted	
3.1.4.27	exodeoxyribonuclease II	transferred to EC 3.1.11.2	
3.1.4.28	exodeoxyribonuclease IV	transferred to EC 3.1.11.3	
3.1.4.29	oligodeoxyribonucleate exonuclease	deleted	
3.1.4.30	endodeoxyribonuclease	transferred to EC 3.1.21.2	
3.1.4.31	DNA 5'-dinucleotidohydrolase	transferred to EC 3.1.11.4	
3.1.4.32	endodeoxyribonuclease (ATP- and S-adenosylmethionine-dependent)	deleted	
3.1.4.33	endodeoxyribonuclease (ATP-hydrolysing)	deleted	
3.1.4.34	hybrid nuclease	deleted	
3.1.4.35	3',5'-cyclic-GMP phosphodiesterase	-	
3.1.4.36	1,2-cyclic-inositol-phosphate phosphodiesterase	transferred to EC 3.1.4.43	
3.1.4.37	2',3'-cyclic-nucleotide 3'-phosphodiesterase	-	
3.1.4.38	glycerophosphocholine cholinephosphodiesterase	-	
3.1.4.39	alkylglycerophosphoethanolamine phosphodiesterase	-	
3.1.4.40	CMP-N-acylneuraminate phosphodiesterase	-	
3.1.4.41	sphingomyelin phosphodiesterase D	-	
3.1.4.42	glycerol-1,2-cyclic-phosphate 2-phosphodiesterase	-	
3.1.4.43	glycerophosphoinositol inositolphosphodiesterase	-	
3.1.4.44	glycerophosphoinositol glycerophosphodiesterase	-	
3.1.4.45	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	-	
3.1.4.46	glycerophosphodiester phosphodiesterase	-	
3.1.4.47	variant-surface-glycoprotein phospholipase C	transferred to EC 4.6.1.14	
3.1.4.48	dolichylphosphate-glucose phosphodiesterase	-	
3.1.4.49	dolichylphosphate-mannose phosphodiesterase	-	
3.1.4.50	glycosylphosphatidylinositol phospholipase D	-	
3.1.4.51	glucose-1-phospho-D-mannosylglycoprotein phosphodiesterase	-	
3.1.4.52	cyclic-guanylate-specific phosphodiesterase	-	
3.1.4.53	3',5'-cyclic-AMP phosphodiesterase	-	
3.1.4.54	N-acetylphosphatidylethanolamine-hydrolysing phospholipase D	-	
3.1.4.55	phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	-	
3.1.4.56	7,8-dihydroneopterin 2',3'-cyclic phosphate phosphodiesterase	-	
3.1.4.57	phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase	-	
3.1.4.58	RNA 2',3'-cyclic 3'-phosphodiesterase	-	
3.1.4.59	cyclic-di-AMP phosphodiesterase	-	
3.1.4.60	pApA phosphodiesterase	-	
3.1.4.61	cyclic 2,3-diphosphoglycerate hydrolase	-	
3.1.5.1	dGTPase	-	
3.1.5.B1	dNTPase	preliminary BRENDA-supplied EC number	
3.1.6.1	arylsulfatase (type I)	-	
3.1.6.2	steryl-sulfatase	-	
3.1.6.B2	fucoidan-2-sulfatase	preliminary BRENDA-supplied EC number	
3.1.6.3	glycosulfatase	-	
3.1.6.4	N-acetylgalactosamine-6-sulfatase	-	
3.1.6.5	sinigrin sulfohydrolase; myrosulfatase	deleted	
3.1.6.6	choline-sulfatase	-	
3.1.6.7	cellulose-polysulfatase	-	
3.1.6.8	cerebroside-sulfatase	-	
3.1.6.9	chondro-4-sulfatase	-	
3.1.6.10	chondro-6-sulfatase	-	
3.1.6.11	disulfoglucosamine-6-sulfatase	-	
3.1.6.12	N-acetylgalactosamine-4-sulfatase	-	
3.1.6.13	iduronate-2-sulfatase	-	
3.1.6.14	N-acetylglucosamine-6-sulfatase	-	
3.1.6.15	N-sulfoglucosamine-3-sulfatase	-	
3.1.6.16	monomethyl-sulfatase	-	
3.1.6.17	D-lactate-2-sulfatase	-	
3.1.6.18	glucuronate-2-sulfatase	-	
3.1.6.19	(R)-specific secondary-alkylsulfatase (type III)	-	
3.1.6.20	S-sulfosulfanyl-L-cysteine sulfohydrolase	-	
3.1.6.21	linear primary-alkylsulfatase	-	
3.1.6.22	branched primary-alkylsulfatase	-	
3.1.7.1	prenyl-diphosphatase	-	
3.1.7.2	guanosine-3',5'-bis(diphosphate) 3'-diphosphatase	-	
3.1.7.3	monoterpenyl-diphosphatase	-	
3.1.7.4	sclareol cyclase	deleted, now covered by EC 4.2.1.133 and EC 4.2.3.141	
3.1.7.5	geranylgeranyl diphosphate diphosphatase	-	
3.1.7.6	farnesyl diphosphatase	-	
3.1.7.7	drimenol synthase	transferred to EC 4.2.3.194	
3.1.7.8	tuberculosinol synthase	transferred to EC 2.5.1.153	
3.1.7.9	isotuberculosinol synthase	transferred to EC 2.5.1.153	
3.1.7.10	(13E)-labda-7,13-dien-15-ol synthase	-	
3.1.7.11	geranyl diphosphate diphosphatase	-	
3.1.7.12	(+)-kolavelool synthase	-	
3.1.7.13	neryl diphosphate diphosphatase	-	
3.1.8.1	aryldialkylphosphatase	-	
3.1.8.2	diisopropyl-fluorophosphatase	-	
3.1.11.1	exodeoxyribonuclease I	-	
3.1.11.2	exodeoxyribonuclease III	-	
3.1.11.3	exodeoxyribonuclease (lambda-induced)	-	
3.1.11.4	exodeoxyribonuclease (phage SP3-induced)	-	
3.1.11.5	exodeoxyribonuclease V	-	
3.1.11.6	exodeoxyribonuclease VII	-	
3.1.11.7	adenosine-5'-diphospho-5'-[DNA] diphosphatase	transferred to EC 3.6.1.71	
3.1.11.8	guanosine-5'-diphospho-5'-[DNA] diphosphatase	transferred to EC 3.6.1.70	
3.1.12.1	5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)	-	
3.1.12.2	DNA-3'-diphospho-5'-guanosine diphosphatase	transferred to EC 3.6.1.72	
3.1.13.1	exoribonuclease II	-	
3.1.13.B1	5'-3' exoribonuclease	preliminary BRENDA-supplied EC number	
3.1.13.2	exoribonuclease H	-	
3.1.13.3	oligonucleotidase	-	
3.1.13.4	poly(A)-specific ribonuclease	-	
3.1.13.5	ribonuclease D	-	
3.1.14.1	yeast ribonuclease	-	
3.1.15.1	venom exonuclease	-	
3.1.15.B1	NrnC nuclease	preliminary BRENDA-supplied EC number	
3.1.16.1	spleen exonuclease	-	
3.1.21.1	deoxyribonuclease I	-	
3.1.21.B1	endonuclease Q	preliminary BRENDA-supplied EC number	
3.1.21.2	deoxyribonuclease IV	-	
3.1.21.B2	restriction endonuclease PabI	preliminary BRENDA-supplied EC number	
3.1.21.3	type I site-specific deoxyribonuclease	-	
3.1.21.B3	mismatch-specific endonuclease	preliminary BRENDA-supplied EC number	
3.1.21.4	type II site-specific deoxyribonuclease	-	
3.1.21.5	type III site-specific deoxyribonuclease	-	
3.1.21.6	CC-preferring endodeoxyribonuclease	-	
3.1.21.7	deoxyribonuclease V	-	
3.1.21.8	T4 deoxyribonuclease II	-	
3.1.21.9	T4 deoxyribonuclease IV	-	
3.1.21.10	crossover junction endodeoxyribonuclease	-	
3.1.22.1	deoxyribonuclease II	-	
3.1.22.2	Aspergillus deoxyribonuclease K1	-	
3.1.22.3	deoxyribonuclease V	transferred to EC 3.1.21.7	
3.1.22.4	crossover junction endodeoxyribonuclease	transferred to EC 3.1.21.10	
3.1.22.5	deoxyribonuclease X	-	
3.1.25.1	deoxyribonuclease (pyrimidine dimer)	-	
3.1.25.2	endodeoxyribonuclease (apurinic or apyrimidinic)	transferred to EC 4.2.99.18	
3.1.26.1	Physarum polycephalum ribonuclease	-	
3.1.26.2	ribonuclease alpha	-	
3.1.26.3	ribonuclease III	-	
3.1.26.4	ribonuclease H	-	
3.1.26.5	ribonuclease P	-	
3.1.26.6	ribonuclease IV	-	
3.1.26.7	ribonuclease P4	-	
3.1.26.8	ribonuclease M5	-	
3.1.26.9	ribonuclease [poly-(U)-specific]	-	
3.1.26.10	ribonuclease IX	-	
3.1.26.11	tRNase Z	-	
3.1.26.12	ribonuclease E	-	
3.1.26.13	retroviral ribonuclease H	-	
3.1.27.1	ribonuclease T2	transferred to EC 4.6.1.19	
3.1.27.B1	pre-mRNA splicing endonuclease EndA	preliminary BRENDA-supplied EC number	
3.1.27.2	Bacillus subtilis ribonuclease	transferred to EC 4.6.1.22	
3.1.27.3	ribonuclease T1	transferred to EC 4.6.1.24	
3.1.27.4	ribonuclease U2	transferred to EC 4.6.1.20	
3.1.27.5	pancreatic ribonuclease	transferred to EC 4.6.1.18	
3.1.27.6	Enterobacter ribonuclease	transferred to EC 4.6.1.21	
3.1.27.7	ribonuclease F	-	
3.1.27.8	Ribonuclease V	-	
3.1.27.9	tRNA-intron endonuclease	transferred to EC 4.6.1.16	
3.1.27.10	rRNA endonuclease	transferred to EC 4.6.1.23	
3.1.30.1	Aspergillus nuclease S1	-	
3.1.30.2	Serratia marcescens nuclease	-	
3.1.31.1	micrococcal nuclease	-	
3.1.99.B1	flap endonuclease-1	preliminary BRENDA-supplied EC number	
3.1.99.B2	XPF endonuclease	preliminary BRENDA-supplied EC number	
3.1.99.B3	Hef endonuclease	preliminary BRENDA-supplied EC number	
3.1.99.B4	DNase xthA	preliminary BRENDA-supplied EC number	
3.1.99.B5	endonuclease SSO2001	preliminary BRENDA-supplied EC number	
3.1.99.B6	endonuclease Bax1	preliminary BRENDA-supplied EC number	
3.2.1.1	alpha-amylase	-	
3.2.1.B1	extracellular agarase	preliminary BRENDA-supplied EC number	
3.2.1.2	beta-amylase	-	
3.2.1.3	glucan 1,4-alpha-glucosidase	-	
3.2.1.B3	sucrose 6-phosphate hydrolase	preliminary BRENDA-supplied EC number	
3.2.1.4	cellulase	-	
3.2.1.5	licheninase	deleted	
3.2.1.6	endo-1,3(4)-beta-glucanase	-	
3.2.1.7	inulinase	-	
3.2.1.8	endo-1,4-beta-xylanase	-	
3.2.1.B8	malto-alpha-amylase (reducing end)	preliminary BRENDA-supplied EC number	
3.2.1.9	amylopectin-1,6-glucosidase	deleted	
3.2.1.10	oligo-1,6-glucosidase	-	
3.2.1.11	dextranase	-	
3.2.1.12	cycloheptaglucanase	deleted, included in EC 3.2.1.54	
3.2.1.13	cyclohexaglucanase	deleted, included in EC 3.2.1.54	
3.2.1.14	chitinase	-	
3.2.1.15	endo-polygalacturonase	-	
3.2.1.16	alginase	deleted	
3.2.1.B16	ipecoside beta-D-glucosidase	preliminary BRENDA-supplied EC number	
3.2.1.17	lysozyme	-	
3.2.1.18	exo-alpha-sialidase	-	
3.2.1.19	heparinase	deleted	
3.2.1.20	alpha-glucosidase	-	
3.2.1.21	beta-glucosidase	-	
3.2.1.22	alpha-galactosidase	-	
3.2.1.23	beta-galactosidase	-	
3.2.1.B23	ginsenosidase type II	preliminary BRENDA-supplied EC number	
3.2.1.24	alpha-mannosidase	-	
3.2.1.25	beta-mannosidase	-	
3.2.1.26	beta-fructofuranosidase	-	
3.2.1.B26	Sulfolobus solfataricus beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.27	alpha-1,3-glucosidase	deleted	
3.2.1.28	alpha,alpha-trehalase	-	
3.2.1.B28	Pyrococcus furiosus beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.29	chitobiase	deleted, included in EC 3.2.1.52	
3.2.1.30	beta-D-acetylglucosaminidase	deleted, included in EC 3.2.1.52	
3.2.1.31	beta-glucuronidase	-	
3.2.1.B31	beta-rutinosidase	preliminary BRENDA-supplied EC number	
3.2.1.32	endo-1,3-beta-xylanase	-	
3.2.1.B32	kojibiose hydrolase	deleted, replaced by EC 3.2.1.216	
3.2.1.33	amylo-alpha-1,6-glucosidase	-	
3.2.1.B33	Sulfolobus shibatae beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.34	chondroitinase	deleted, included in EC 3.2.1.35	
3.2.1.B34	Sulfolobus acidocaldarius beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.35	hyaluronoglucosaminidase	-	
3.2.1.B35	Thermococcus kodakaraensis beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.36	hyaluronoglucuronidase	-	
3.2.1.B36	maltose-forming alpha-amylase	preliminary BRENDA-supplied EC number	
3.2.1.37	xylan 1,4-beta-xylosidase	-	
3.2.1.B37	N-acetylmuramoyl-glycoprotein endo-beta-N-acetylglucosaminidase	preliminary BRENDA-supplied EC number	
3.2.1.38	beta-D-fucosidase	-	
3.2.1.39	glucan endo-1,3-beta-D-glucosidase	-	
3.2.1.40	alpha-L-rhamnosidase	-	
3.2.1.B40	Pyrococcus horikoshii beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.41	pullulanase	-	
3.2.1.B41	Thermus thermophilus beta-glycosidase	preliminary BRENDA-supplied EC number	
3.2.1.42	GDP-glucosidase	-	
3.2.1.B42	cellulose 1,4-beta-cellotetraosidase (non-reducing end)	preliminary BRENDA-supplied EC number	
3.2.1.43	beta-L-rhamnosidase	-	
3.2.1.B43	keratanase II	preliminary BRENDA-supplied Ec number	
3.2.1.44	fucoidanase	transferred to EC 3.2.1.211 and EC 3.2.1.212	
3.2.1.B44	glycyrrhizin glucuronohydrolase (glycyrrhetinic acid 3-O-beta-D-glucuronide-forming)	preliminary BRENDA-supplied EC number	
3.2.1.45	glucosylceramidase	-	
3.2.1.46	galactosylceramidase	-	
3.2.1.47	galactosylgalactosylglucosylceramidase	deleted, reaction covered by EC 3.2.1.22	
3.2.1.B47	exo-fucoidanase	preliminary BRENDA-supplied EC number	
3.2.1.48	sucrose alpha-glucosidase	-	
3.2.1.B48	(Ara-f)4-Hyp alpha-L-arabinofuranosidase	preliminary BRENDA-supplied EC number	
3.2.1.49	alpha-N-acetylgalactosaminidase	-	
3.2.1.50	alpha-N-acetylglucosaminidase	-	
3.2.1.51	alpha-L-fucosidase	-	
3.2.1.52	beta-N-acetylhexosaminidase	-	
3.2.1.53	beta-N-acetylgalactosaminidase	-	
3.2.1.54	cyclomaltodextrinase	-	
3.2.1.55	non-reducing end alpha-L-arabinofuranosidase	-	
3.2.1.56	glucuronosyl-disulfoglucosamine glucuronidase	-	
3.2.1.57	isopullulanase	-	
3.2.1.58	glucan 1,3-beta-glucosidase	-	
3.2.1.59	glucan endo-1,3-alpha-glucosidase	-	
3.2.1.60	glucan 1,4-alpha-maltotetraohydrolase	-	
3.2.1.61	mycodextranase	-	
3.2.1.62	glycosylceramidase	-	
3.2.1.63	1,2-alpha-L-fucosidase	-	
3.2.1.64	2,6-beta-fructan 6-levanbiohydrolase	-	
3.2.1.65	levanase	-	
3.2.1.66	quercitrinase	deleted, reaction covered by EC 3.2.1.40	
3.2.1.67	galacturonan 1,4-alpha-galacturonidase	-	
3.2.1.68	isoamylase	-	
3.2.1.69	amylopectin 6-glucanohydrolase	deleted, included in EC 3.2.1.41	
3.2.1.70	glucan 1,6-alpha-glucosidase	-	
3.2.1.71	glucan endo-1,2-beta-glucosidase	-	
3.2.1.72	xylan 1,3-beta-xylosidase	-	
3.2.1.73	licheninase	-	
3.2.1.74	glucan 1,4-beta-glucosidase	-	
3.2.1.75	glucan endo-1,6-beta-glucosidase	-	
3.2.1.76	L-iduronidase	-	
3.2.1.77	mannan 1,2-(1,3)-alpha-mannosidase	-	
3.2.1.78	mannan endo-1,4-beta-mannosidase	-	
3.2.1.79	alpha-L-arabinofuranoside hydrolase	deleted, included in EC 3.2.1.55	
3.2.1.80	fructan beta-fructosidase	-	
3.2.1.81	beta-agarase	-	
3.2.1.82	exo-poly-alpha-digalacturonosidase	-	
3.2.1.83	kappa-carrageenase	-	
3.2.1.84	glucan 1,3-alpha-glucosidase	-	
3.2.1.85	6-phospho-beta-galactosidase	-	
3.2.1.86	6-phospho-beta-glucosidase	-	
3.2.1.87	capsular-polysaccharide endo-1,3-alpha-galactosidase	-	
3.2.1.88	non-reducing end beta-L-arabinopyranosidase	-	
3.2.1.89	arabinogalactan endo-beta-1,4-galactanase	-	
3.2.1.90	arabinogalactan endo-1,3-beta-galactosidase	deleted, not sufficiently characterized	
3.2.1.91	cellulose 1,4-beta-cellobiosidase (non-reducing end)	-	
3.2.1.92	peptidoglycan beta-N-acetylmuramidase	-	
3.2.1.93	alpha,alpha-phosphotrehalase	-	
3.2.1.94	glucan 1,6-alpha-isomaltosidase	-	
3.2.1.95	dextran 1,6-alpha-isomaltotriosidase	-	
3.2.1.96	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	-	
3.2.1.97	endo-alpha-N-acetylgalactosaminidase	-	
3.2.1.98	glucan 1,4-alpha-maltohexaosidase	-	
3.2.1.99	arabinan endo-1,5-alpha-L-arabinanase	-	
3.2.1.100	mannan 1,4-mannobiosidase	-	
3.2.1.101	mannan endo-1,6-alpha-mannosidase	-	
3.2.1.102	blood-group-substance endo-1,4-beta-galactosidase	-	
3.2.1.103	keratan-sulfate endo-1,4-beta-galactosidase	-	
3.2.1.104	steryl-beta-glucosidase	-	
3.2.1.105	3alpha(S)-strictosidine beta-glucosidase	-	
3.2.1.106	mannosyl-oligosaccharide glucosidase	-	
3.2.1.107	protein-glucosylgalactosylhydroxylysine glucosidase	-	
3.2.1.108	lactase	-	
3.2.1.109	endogalactosaminidase	-	
3.2.1.110	mucinaminylserine mucinaminidase	deleted, identical to EC 3.2.1.97, glycopeptide alpha-N-acetylgalactosaminidase	
3.2.1.111	1,3-alpha-L-fucosidase	-	
3.2.1.112	2-deoxyglucosidase	-	
3.2.1.113	mannosyl-oligosaccharide 1,2-alpha-mannosidase	-	
3.2.1.114	mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase	-	
3.2.1.115	branched-dextran exo-1,2-alpha-glucosidase	-	
3.2.1.116	glucan 1,4-alpha-maltotriohydrolase	-	
3.2.1.117	amygdalin beta-glucosidase	-	
3.2.1.118	prunasin beta-glucosidase	-	
3.2.1.119	vicianin beta-glucosidase	-	
3.2.1.120	oligoxyloglucan beta-glycosidase	-	
3.2.1.121	polymannuronate hydrolase	-	
3.2.1.122	maltose-6'-phosphate glucosidase	-	
3.2.1.123	endoglycosylceramidase	-	
3.2.1.124	3-deoxy-2-octulosonidase	-	
3.2.1.125	raucaffricine beta-glucosidase	-	
3.2.1.126	coniferin beta-glucosidase	-	
3.2.1.127	1,6-alpha-L-fucosidase	-	
3.2.1.128	glycyrrhizin hydrolase	-	
3.2.1.129	endo-alpha-sialidase	-	
3.2.1.130	glycoprotein endo-alpha-1,2-mannosidase	-	
3.2.1.131	xylan alpha-1,2-glucuronosidase	-	
3.2.1.132	chitosanase	-	
3.2.1.133	glucan 1,4-alpha-maltohydrolase	-	
3.2.1.134	difructose-dianhydride-I hydrolase	transferred. Now EC 4.2.1.179	
3.2.1.135	neopullulanase	-	
3.2.1.136	glucuronoarabinoxylan endo-1,4-beta-xylanase	-	
3.2.1.137	mannan exo-1,2-1,6-alpha-mannosidase	-	
3.2.1.138	anhydrosialidase	transferred to EC 4.2.2.15	
3.2.1.139	alpha-glucuronidase	-	
3.2.1.140	lacto-N-biosidase	-	
3.2.1.141	4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase	-	
3.2.1.142	limit dextrinase	-	
3.2.1.143	poly(ADP-ribose) glycohydrolase	-	
3.2.1.144	3-deoxyoctulosonase	-	
3.2.1.145	galactan 1,3-beta-galactosidase	-	
3.2.1.146	beta-galactofuranosidase	-	
3.2.1.147	thioglucosidase	-	
3.2.1.148	ribosylhomocysteinase	transferred to EC 3.13.1.2	
3.2.1.149	beta-primeverosidase	-	
3.2.1.150	oligoxyloglucan reducing-end-specific cellobiohydrolase	-	
3.2.1.151	xyloglucan-specific endo-beta-1,4-glucanase	-	
3.2.1.152	mannosylglycoprotein endo-beta-mannosidase	-	
3.2.1.153	fructan beta-(2,1)-fructosidase	-	
3.2.1.154	fructan beta-(2,6)-fructosidase	-	
3.2.1.155	xyloglucan-specific exo-beta-1,4-glucanase	-	
3.2.1.156	oligosaccharide reducing-end xylanase	-	
3.2.1.157	iota-carrageenase	-	
3.2.1.158	alpha-agarase	-	
3.2.1.159	alpha-neoagaro-oligosaccharide hydrolase	-	
3.2.1.160	xyloglucan-specific exo-beta-1,4-glucanase	deleted, identical to EC 3.2.1.155	
3.2.1.161	beta-apiosyl-beta-glucosidase	-	
3.2.1.162	lambda-carrageenase	-	
3.2.1.163	1,6-alpha-D-mannosidase	-	
3.2.1.164	galactan endo-1,6-beta-galactosidase	-	
3.2.1.165	exo-1,4-beta-D-glucosaminidase	-	
3.2.1.166	heparanase	-	
3.2.1.167	baicalin-beta-D-glucuronidase	-	
3.2.1.168	hesperidin 6-O-alpha-L-rhamnosyl-beta-D-glucosidase	-	
3.2.1.169	protein O-GlcNAcase	-	
3.2.1.170	mannosylglycerate hydrolase	-	
3.2.1.171	rhamnogalacturonan hydrolase	-	
3.2.1.172	unsaturated rhamnogalacturonyl hydrolase	-	
3.2.1.173	rhamnogalacturonan galacturonohydrolase	-	
3.2.1.174	rhamnogalacturonan rhamnohydrolase	-	
3.2.1.175	beta-D-glucopyranosyl abscisate beta-glucosidase	-	
3.2.1.176	cellulose 1,4-beta-cellobiosidase (reducing end)	-	
3.2.1.177	alpha-D-xyloside xylohydrolase	-	
3.2.1.178	beta-porphyranase	-	
3.2.1.179	gellan tetrasaccharide unsaturated glucuronosyl hydrolase	-	
3.2.1.180	unsaturated chondroitin disaccharide hydrolase	-	
3.2.1.181	galactan endo-beta-1,3-galactanase	-	
3.2.1.182	4-hydroxy-7-methoxy-3-oxo-3,4-dihydro-2H-1,4-benzoxazin-2-yl glucoside beta-D-glucosidase	-	
3.2.1.183	UDP-N-acetylglucosamine 2-epimerase (hydrolysing)	-	
3.2.1.184	UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing)	-	
3.2.1.185	non-reducing end beta-L-arabinofuranosidase	-	
3.2.1.186	protodioscin 26-O-beta-D-glucosidase	-	
3.2.1.187	(Ara-f)3-Hyp beta-L-arabinobiosidase	-	
3.2.1.188	avenacosidase	-	
3.2.1.189	dioscin glycosidase (diosgenin-forming)	-	
3.2.1.190	dioscin glycosidase (3-O-beta-D-Glc-diosgenin-forming)	-	
3.2.1.191	ginsenosidase type III	-	
3.2.1.192	ginsenoside Rb1 beta-glucosidase	-	
3.2.1.193	ginsenosidase type I	-	
3.2.1.194	ginsenosidase type IV	-	
3.2.1.195	20-O-multi-glycoside ginsenosidase	-	
3.2.1.196	limit dextrin alpha-1,6-maltotetraose-hydrolase	-	
3.2.1.197	beta-1,2-mannosidase	-	
3.2.1.198	alpha-mannan endo-1,2-alpha-mannanase	-	
3.2.1.199	sulfoquinovosidase	-	
3.2.1.200	exo-chitinase (non-reducing end)	-	
3.2.1.201	exo-chitinase (reducing end)	-	
3.2.1.202	endo-chitodextinase	-	
3.2.1.203	carboxymethylcellulase	-	
3.2.1.204	1,3-alpha-isomaltosidase	-	
3.2.1.205	isomaltose glucohydrolase	-	
3.2.1.206	oleuropein beta-glucosidase	-	
3.2.1.207	mannosyl-oligosaccharide alpha-1,3-glucosidase	-	
3.2.1.208	glucosylglycerate hydrolase	-	
3.2.1.209	endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase	-	
3.2.1.210	endoplasmic reticulum Man8GlcNAc2 1,2-alpha-mannosidase	-	
3.2.1.211	endo-(1->3)-fucoidanase	-	
3.2.1.212	endo-(1->4)-fucoidanase	-	
3.2.1.213	galactan exo-1,6-beta-galactobiohydrolase (non-reducing end)	-	
3.2.1.214	exo beta-1,2-glucooligosaccharide sophorohydrolase (non-reducing end)	-	
3.2.1.215	arabinogalactan exo alpha-(1,3)-alpha-D-galactosyl-(1->3)-L-arabinofuranosidase (non-reducing end)	-	
3.2.1.216	kojibiose hydrolase	-	
3.2.1.217	exo-acting protein-alpha-N-acetylgalactosaminidase	-	
3.2.2.1	purine nucleosidase	-	
3.2.2.2	inosine nucleosidase	-	
3.2.2.3	uridine nucleosidase	-	
3.2.2.4	AMP nucleosidase	-	
3.2.2.5	NAD+ glycohydrolase	-	
3.2.2.B5	8-oxoguanine DNA glycosylase	preliminary BRENDA-supplied EC number	
3.2.2.6	ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase	-	
3.2.2.B6	[protein ADP-ribosylaspartate] hydrolase	preliminary BRENDA-supplied EC number	
3.2.2.7	adenosine nucleosidase	-	
3.2.2.8	ribosylpyrimidine nucleosidase	-	
3.2.2.9	adenosylhomocysteine nucleosidase	-	
3.2.2.10	pyrimidine-5'-nucleotide nucleosidase	-	
3.2.2.11	beta-aspartyl-N-acetylglucosaminidase	-	
3.2.2.12	inosinate nucleosidase	-	
3.2.2.13	1-methyladenosine nucleosidase	-	
3.2.2.14	NMN nucleosidase	-	
3.2.2.15	DNA-deoxyinosine glycosylase	-	
3.2.2.16	methylthioadenosine nucleosidase	-	
3.2.2.17	deoxyribodipyrimidine endonucleosidase	-	
3.2.2.18	glycopeptide N-glycosidase	deleted, included in EC 3.5.1.52	
3.2.2.19	[protein ADP-ribosylarginine] hydrolase	-	
3.2.2.20	DNA-3-methyladenine glycosylase I	-	
3.2.2.21	DNA-3-methyladenine glycosylase II	-	
3.2.2.22	rRNA N-glycosylase	-	
3.2.2.23	DNA-formamidopyrimidine glycosylase	-	
3.2.2.24	ADP-ribosyl-[dinitrogen reductase] hydrolase	-	
3.2.2.25	N-methyl nucleosidase	-	
3.2.2.26	futalosine hydrolase	-	
3.2.2.27	uracil-DNA glycosylase	-	
3.2.2.28	double-stranded uracil-DNA glycosylase	-	
3.2.2.29	thymine-DNA glycosylase	-	
3.2.2.30	aminodeoxyfutalosine nucleosidase	-	
3.2.2.31	adenine glycosylase	-	
3.2.3.1	thioglucosidase	transferred to EC 3.2.1.147	
3.3.1.1	adenosylhomocysteinase	transferred, now EC 3.13.2.1	
3.3.1.B1	inosylhomocysteinase	deleted, replaced by EC 3.13.2.B1	
3.3.1.2	S-adenosyl-L-methionine hydrolase (L-homoserine-forming)	transferred, now EC 3.13.2.2	
3.3.1.3	ribosylhomocysteinase	transferred to EC 3.2.1.148	
3.3.2.1	isochorismatase	-	
3.3.2.B1	2-amino-2-deoxyisochorismate hydrolase	deleted, replaced by EC 3.3.2.15	
3.3.2.2	lysoplasmalogenase	-	
3.3.2.3	epoxide hydrolase	deleted. Now classified as EC 3.3.2.9, microsomal epoxide hydrolase, and EC 3.3.2.10, soluble epoxide hydrolase	
3.3.2.4	trans-epoxysuccinate hydrolase	-	
3.3.2.5	alkenylglycerophosphoethanolamine hydrolase	transferred. Now included in EC 3.3.2.2	
3.3.2.6	leukotriene-A4 hydrolase	-	
3.3.2.7	hepoxilin-epoxide hydrolase	-	
3.3.2.8	limonene-1,2-epoxide hydrolase	-	
3.3.2.9	microsomal epoxide hydrolase	-	
3.3.2.10	soluble epoxide hydrolase	-	
3.3.2.11	cholesterol-5,6-oxide hydrolase	-	
3.3.2.12	oxepin-CoA hydrolase	-	
3.3.2.13	chorismatase	-	
3.3.2.14	2,4-dinitroanisole O-demethylase	-	
3.3.2.15	trans-2,3-dihydro-3-hydroxyanthranilic acid synthase	-	
3.4.1.1	leucine aminopeptidase	transferred to EC 3.4.11.1	
3.4.1.2	aminopeptidase	transferred to EC 3.4.11.2	
3.4.1.3	aminotripeptidase	transferred to EC 3.4.11.4	
3.4.1.4	proline iminopeptidase	transferred to EC 3.4.11.5	
3.4.2.1	carboxypeptidase A	transferred to EC 3.4.17.1	
3.4.2.2	carboxypeptidase B	transferred to EC 3.4.17.2	
3.4.2.3	yeast carboxypeptidase	transferred to EC 3.4.17.4	
3.4.3.1	glycyl-glycine dipeptidase	transferred to EC 3.4.13.18	
3.4.3.2	glycyl-leucine dipeptidase	transferred to EC 3.4.13.18	
3.4.3.3	aminoacyl-histidine dipeptidase, carnosinase	transferred to EC 3.4.13.3	
3.4.3.4	aminoacyl-methylhistidine dipeptidase, anserinase	transferred to EC 3.4.13.5	
3.4.3.5	cysteinyl-glycine dipeptidase	transferred to EC 3.4.11.2	
3.4.3.6	iminodipeptidase	transferred to EC 3.4.13.18	
3.4.3.7	imidodipeptidase, prolidase	transferred to EC 3.4.13.9	
3.4.4.1	pepsin	transferred to EC 3.4.23.1	
3.4.4.2	pepsin B	transferred to EC 3.4.23.2	
3.4.4.3	rennin	transferred to EC 3.4.23.4	
3.4.4.4	trypsin	transferred to EC 3.4.21.4	
3.4.4.5	chymotrypsin	transferred to EC 3.4.21.1	
3.4.4.6	chymotrypsin B	transferred to EC 3.4.21.1	
3.4.4.7	pancreatopeptidase E	transferred to EC 3.4.21.36, EC 3.4.21.37	
3.4.4.8	enteropeptidase	transferred to EC 3.4.21.9	
3.4.4.9	cathepsin C	transferred to EC 3.4.14.1	
3.4.4.10	papain	transferred to EC 3.4.22.2	
3.4.4.11	chymopapain	transferred to EC 3.4.22.6	
3.4.4.12	ficin	transferred to EC 3.4.22.3	
3.4.4.13	thrombin	transferred to EC 3.4.21.5	
3.4.4.14	plasmin	transferred to EC 3.4.21.7	
3.4.4.15	renin	transferred to EC 3.4.23.15	
3.4.4.16	subtilopeptidase A	transferred to EC 3.4.21.62, EC 3.4.21.63, EC 3.4.21.64, EC 3.4.21.65, EC 3.4.21.66, EC 3.4.21.67	
3.4.4.17	aspergillopeptidase A	transferred to EC 3.4.23.20, EC 3.4.23.21, EC 3.4.23.22, EC 3.4.23.23, EC 3.4.23.24, EC 3.4.23.25, EC 3.4.23.26, EC 3.4.21.103, EC 3.4.23.28, EC 3.4.23.29, and EC 3.4.23.30
-30	
3.4.4.18	streptococcus peptidase A	transferred to EC 3.4.22.10	
3.4.4.19	clostridiopeptidase A	transferred to EC 3.4.24.3	
3.4.4.20	clostridiopeptidase B	transferred to EC 3.4.22.8	
3.4.4.21	kallikrein	transferred to EC 3.4.21.34 and EC 3.4.21.35	
3.4.4.22	recommended Name never specified	transferred to EC 3.4.23.3	
3.4.4.23	recommended Name never specified	transferred to EC 3.4.23.5	
3.4.4.24	recommended Name never specified	transferred to EC 3.4.22.32, EC 3.4.22.33	
3.4.4.25	keratinase	deleted	
3.4.11.1	leucyl aminopeptidase	-	
3.4.11.2	membrane alanyl aminopeptidase	-	
3.4.11.3	cystinyl aminopeptidase	-	
3.4.11.B3	Sulfolobus solfataricus aminopeptidase	preliminary BRENDA-supplied EC number	
3.4.11.4	tripeptide aminopeptidase	-	
3.4.11.B4	Pyrococcus horikoshii deblocking aminopeptidase	preliminary BRENDA-supplied EC number	
3.4.11.5	prolyl aminopeptidase	-	
3.4.11.B5	Thermococcus onnurineus deblocking aminopeptidase	preliminary BRENDA-supplied EC number	
3.4.11.6	aminopeptidase B	-	
3.4.11.B6	Thermococcus kodakarensis deblocking aminopeptidase	preliminary BRENDA-supplied EC number	
3.4.11.7	glutamyl aminopeptidase	-	
3.4.11.B7	arginyl aminopeptidase PH1704	preliminary BRENDA-supplied EC number	
3.4.11.8	pyroglutamyl aminopeptidase	transferred to EC 3.4.19.3	
3.4.11.B8	aminopeptidase TET1	preliminary BRENDA-supplied EC number	
3.4.11.9	Xaa-Pro aminopeptidase	-	
3.4.11.B9	TET2 peptidase	preliminary BRENDA-supplied EC number	
3.4.11.10	bacterial leucyl aminopeptidase	-	
3.4.11.11	aminopeptidase	deleted	
3.4.11.12	thermophilic aminopeptidase	deleted	
3.4.11.13	Clostridial aminopeptidase	-	
3.4.11.14	cytosol alanyl aminopeptidase	-	
3.4.11.15	aminopeptidase Y	-	
3.4.11.16	Xaa-Trp aminopeptidase	-	
3.4.11.17	tryptophanyl aminopeptidase	-	
3.4.11.18	methionyl aminopeptidase	-	
3.4.11.19	D-stereospecific aminopeptidase	-	
3.4.11.20	aminopeptidase Ey	-	
3.4.11.21	aspartyl aminopeptidase	-	
3.4.11.22	aminopeptidase I	-	
3.4.11.23	PepB aminopeptidase	-	
3.4.11.24	aminopeptidase S	-	
3.4.11.25	beta-peptidyl aminopeptidase	-	
3.4.11.26	intermediate cleaving peptidase 55	-	
3.4.13.1	glycyl-glycine dipeptidase	transferred to EC 3.4.13.18	
3.4.13.2	glycyl-leucine dipeptidase	transferred to EC 3.4.13.18	
3.4.13.3	Xaa-His dipeptidase	deleted, now covered by EC 3.4.13.18, cytosol nonspecific dipeptidase and EC 3.4.13.20, beta-Ala-His dipeptidase	
3.4.13.4	Xaa-Arg dipeptidase	-	
3.4.13.5	Xaa-methyl-His dipeptidase	-	
3.4.13.6	Cys-Gly dipeptidase	transferred to EC 3.4.11.6	
3.4.13.7	Glu-Glu dipeptidase	-	
3.4.13.8	Pro-X dipeptidase	transferred to EC 3.4.13.18	
3.4.13.9	Xaa-Pro dipeptidase	-	
3.4.13.10	beta-aspartyldipeptidase	transferred to EC 3.4.19.5	
3.4.13.11	dipeptidase	transferred to EC 3.4.13.18, EC 3.4.13.19	
3.4.13.12	Met-Xaa dipeptidase	-	
3.4.13.13	homocarnosinase	transferred to EC 3.4.13.3	
3.4.13.14	gamma-glutamyldipeptidase	deleted	
3.4.13.15	N2-beta-alanylarginine dipeptidase	transferred to EC 3.4.13.18	
3.4.13.16	aspartylphenylalanine dipeptidase	deleted	
3.4.13.17	non-stereospecific dipeptidase	-	
3.4.13.18	cytosol nonspecific dipeptidase	-	
3.4.13.19	membrane dipeptidase	-	
3.4.13.20	beta-Ala-His dipeptidase	-	
3.4.13.21	dipeptidase E	-	
3.4.13.22	D-Ala-D-Ala dipeptidase	-	
3.4.13.23	cysteinylglycine-S-conjugate dipeptidase	-	
3.4.14.1	dipeptidyl-peptidase I	-	
3.4.14.2	dipeptidyl-peptidase II	-	
3.4.14.3	acylamino-acid-releasing enzyme	transferred to EC 3.4.19.1	
3.4.14.4	dipeptidyl-peptidase III	-	
3.4.14.5	dipeptidyl-peptidase IV	-	
3.4.14.6	dipeptidyl-dipeptidase	-	
3.4.14.7	tetralysine endopeptidase	deleted	
3.4.14.8	tripeptidyl peptidase	transferred to EC 3.4.14.9, EC 3.4.14.10	
3.4.14.9	tripeptidyl-peptidase I	-	
3.4.14.10	tripeptidyl-peptidase II	-	
3.4.14.11	Xaa-Pro dipeptidyl-peptidase	-	
3.4.14.12	Xaa-Xaa-Pro tripeptidyl-peptidase	-	
3.4.14.13	gamma-D-glutamyl-L-lysine dipeptidyl-peptidase	-	
3.4.14.14	[mycofactocin precursor peptide] peptidase	-	
3.4.15.1	peptidyl-dipeptidase A	-	
3.4.15.2	pepdidyl carboxyamidase	transferred to EC 3.4.19.2	
3.4.15.3	dipeptidyl carboxypeptidase	transferred to EC 3.4.15.5	
3.4.15.4	Peptidyl-dipeptidase B	-	
3.4.15.5	Peptidyl-dipeptidase Dcp	-	
3.4.15.6	cyanophycinase	-	
3.4.16.1	serine carboxypeptidase	transferred to EC 3.4.16.5, EC 3.4.16.6	
3.4.16.2	lysosomal Pro-Xaa carboxypeptidase	-	
3.4.16.3	tyrosine carboxypeptidase	transferred to EC 3.4.16.5	
3.4.16.4	serine-type D-Ala-D-Ala carboxypeptidase	-	
3.4.16.5	carboxypeptidase C	-	
3.4.16.6	carboxypeptidase D	-	
3.4.17.1	carboxypeptidase A	-	
3.4.17.B1	Sulfolobus solfataricus carboxypeptidase	preliminary BRENDA-supplied EC number	
3.4.17.2	carboxypeptidase B	-	
3.4.17.3	lysine carboxypeptidase	-	
3.4.17.4	Gly-Xaa carboxypeptidase	-	
3.4.17.B4	Thermococcus onnurineus carboxypeptidase	preliminary BRENDA-supplied EC number	
3.4.17.5	aspartate carboxypeptidase	deleted	
3.4.17.B5	Pyrococcus furiosus carboxypeptidase	preliminary BRENDA-supplied EC number	
3.4.17.6	alanine carboxypeptidase	-	
3.4.17.7	acylmuramoyl-alanine carboxypeptidase	transferred to EC 3.4.19.10	
3.4.17.8	muramoylpentapeptide carboxypeptidase	-	
3.4.17.9	carboxypeptidase S	transferred to EC 3.4.17.4	
3.4.17.10	carboxypeptidase E	-	
3.4.17.11	glutamate carboxypeptidase	-	
3.4.17.12	carboxypeptidase M	-	
3.4.17.13	Muramoyltetrapeptide carboxypeptidase	-	
3.4.17.14	Zinc D-Ala-D-Ala carboxypeptidase	-	
3.4.17.15	carboxypeptidase A2	-	
3.4.17.16	membrane Pro-Xaa carboxypeptidase	-	
3.4.17.17	tubulinyl-Tyr carboxypeptidase	-	
3.4.17.18	carboxypeptidase T	-	
3.4.17.19	Carboxypeptidase Taq	-	
3.4.17.20	Carboxypeptidase U	-	
3.4.17.21	Glutamate carboxypeptidase II	-	
3.4.17.22	metallocarboxypeptidase D	-	
3.4.17.23	angiotensin-converting enzyme 2	-	
3.4.17.24	tubulin-glutamate carboxypeptidase	-	
3.4.17.25	glutathione-S-conjugate glycine hydrolase	-	
3.4.18.1	cathepsin X	-	
3.4.19.1	acylaminoacyl-peptidase	-	
3.4.19.2	peptidyl-glycinamidase	-	
3.4.19.3	pyroglutamyl-peptidase I	-	
3.4.19.4	N-acetylmethionylpeptide peptidase	deleted	
3.4.19.5	beta-aspartyl-peptidase	-	
3.4.19.6	pyroglutamyl-peptidase II	-	
3.4.19.7	N-Formylmethionyl-peptidase	-	
3.4.19.8	recommended Name never specified	transferred to EC 3.4.17.21	
3.4.19.9	folate gamma-glutamyl hydrolase	-	
3.4.19.10	acylmuramoyl-Ala peptidase	transferred to EC 3.5.1.28	
3.4.19.11	gamma-D-glutamyl-meso-diaminopimelate peptidase	-	
3.4.19.12	ubiquitinyl hydrolase 1	-	
3.4.19.13	glutathione gamma-glutamate hydrolase	-	
3.4.19.14	leukotriene-C4 hydrolase	-	
3.4.19.15	desampylase	-	
3.4.19.16	glucosinolate gamma-glutamyl hydrolase	-	
3.4.21.1	chymotrypsin	-	
3.4.21.B1	hyaluronan-binding serine protease	preliminary BRENDA-supplied EC number	
3.4.21.2	chymotrypsin C	-	
3.4.21.B2	granzyme M	preliminary BRENDA-supplied EC number	
3.4.21.3	metridin	-	
3.4.21.B3	duodenase	preliminary BRENDA-supplied EC number	
3.4.21.4	trypsin	-	
3.4.21.B4	granzyme K	preliminary BRENDA-supplied EC number	
3.4.21.5	thrombin	-	
3.4.21.B5	mast cell protease 5	preliminary BRENDA-supplied EC number	
3.4.21.6	coagulation factor Xa	-	
3.4.21.B6	prostasin	preliminary BRENDA-supplied EC number	
3.4.21.7	plasmin	-	
3.4.21.B7	mannan-binding lectin-associated serine protease 1	preliminary BRENDA-supplied EC number	
3.4.21.8	kallikrein	transferred to EC 3.4.21.34, EC 3.4.21.35	
3.4.21.9	enteropeptidase	-	
3.4.21.10	acrosin	-	
3.4.21.B10	neurosin	preliminary BRENDA-supplied EC number	
3.4.21.11	elastase	transferred to EC 3.4.21.36, EC 3.4.21.37	
3.4.21.12	alpha-lytic endopeptidase	-	
3.4.21.B12	prostase	preliminary BRENDA-supplied EC number	
3.4.21.13	phaseolus proteinase	transferred to EC 3.4.16.1	
3.4.21.14	microbial serine proteases	transferred to EC 3.4.21.62, EC 3.4.21.63, EC 3.4.21.64, EC 3.4.21.65, EC 3.4.21.66, EC 3.4.21.67	
3.4.21.15	Aspergillus alkaline proteinase	transferred to EC 3.4.21.63	
3.4.21.16	Alternaria serine proteinase	deleted	
3.4.21.17	Arthrobacter serine proteinase	deleted	
3.4.21.18	Tenebrio alpha-proteinase	deleted	
3.4.21.19	glutamyl endopeptidase	-	
3.4.21.20	cathepsin G	-	
3.4.21.21	coagulation factor VIIa	-	
3.4.21.B21	trepolisin	preliminary BRENDA-supplied EC number	
3.4.21.22	coagulation factor IXa	-	
3.4.21.23	Vipera russelli proteinase	deleted	
3.4.21.24	red cell neutral endopeptidase	deleted	
3.4.21.B24	proprotein convertase 4	preliminary BRENDA-supplied EC number	
3.4.21.25	cucumisin	-	
3.4.21.B25	PACE4 proprotein convertase	preliminary BRENDA-supplied EC number	
3.4.21.26	prolyl oligopeptidase	-	
3.4.21.B26	proprotein convertase 5	preliminary BRENDA-supplied EC number	
3.4.21.27	coagulation factor XIa	-	
3.4.21.B27	proprotein convertase 7	preliminary BRENDA-supplied EC number	
3.4.21.28	Agkistrodon serine proteinase	transferred to EC 3.4.21.74	
3.4.21.B28	fibroblast activation protein alpha subunit	preliminary BRENDA-supplied EC number	
3.4.21.29	Bothrops atrox serine proteinase	transferred to EC 3.4.21.74	
3.4.21.30	Crotalus adamanteus serine proteinase	transferred to EC 3.4.21.74	
3.4.21.B30	UmuD protein	preliminary BRENDA-supplied EC number	
3.4.21.31	urokinase	transferred to EC 3.4.21.68, EC 3.4.21.73	
3.4.21.32	brachyurin	-	
3.4.21.33	Entomophthora collagenolytic proteinase	deleted	
3.4.21.34	plasma kallikrein	-	
3.4.21.B34	tricorn core protease (archaea)	preliminary BRENDA-supplied EC number	
3.4.21.35	tissue kallikrein	-	
3.4.21.36	pancreatic elastase	-	
3.4.21.37	leukocyte elastase	-	
3.4.21.38	coagulation factor XIIa	-	
3.4.21.39	chymase	-	
3.4.21.B39	stratum corneum tryptic enzyme	preliminary BRENDA-supplied EC number	
3.4.21.40	submandibular proteinase A	deleted	
3.4.21.B40	kallikrein 9	preliminary BRENDA-supplied EC number	
3.4.21.41	complement subcomponent C1r	-	
3.4.21.B41	kallikrein 10	preliminary BRENDA-supplied EC number	
3.4.21.42	complement subcomponent C1s	-	
3.4.21.B42	hippostasin	preliminary BRENDA-supplied EC number	
3.4.21.43	classical-complement-pathway C3/C5 convertase	-	
3.4.21.B43	kallikrein 12	preliminary BRENDA-supplied EC number	
3.4.21.44	complement component C5 convertase	transferred to EC 3.4.21.43	
3.4.21.45	complement factor I	-	
3.4.21.B45	kallikrein 14	preliminary BRENDA-supplied EC number	
3.4.21.46	complement factor D	-	
3.4.21.47	alternative-complement-pathway C3/C5 convertase	-	
3.4.21.48	cerevisin	-	
3.4.21.B48	kumamolysin	preliminary BRENDA-supplied EC number	
3.4.21.49	hypodermin C	-	
3.4.21.B49	ctpB peptidase	preliminary BRENDA-supplied EC number	
3.4.21.50	lysyl endopeptidase	-	
3.4.21.B50	DegQ peptidase	preliminary BRENDA-supplied EC number	
3.4.21.51	leukocyte-membrane neutral endopeptidase	deleted	
3.4.21.52	cathepsin R	deleted	
3.4.21.B52	thermostable serine endopeptidase (Sulfolobus)	preliminary BRENDA-supplied EC number	
3.4.21.53	Endopeptidase La	-	
3.4.21.54	gamma-Renin	-	
3.4.21.B54	Pyrococcus abyssi serine endopeptidase	preliminary BRENDA-supplied EC number	
3.4.21.55	Venombin AB	-	
3.4.21.B55	pyrolysin	preliminary BRENDA-supplied EC number	
3.4.21.56	euphorbain	deleted	
3.4.21.B56	Pyrococcus horikoshii membrane protease PH1510	preliminary BRENDA-supplied EC number	
3.4.21.57	Leucyl endopeptidase	-	
3.4.21.B57	pernisine	preliminary BRENDA-supplied EC number	
3.4.21.58	prohormone serine proteinase	deleted	
3.4.21.B58	pernilase	preliminary BRENDA-supplied EC number	
3.4.21.59	Tryptase	-	
3.4.21.B59	granzyme H	preliminary BRENDA-supplied EC number	
3.4.21.60	Scutelarin	-	
3.4.21.B60	transmembrane protease serine 2	deleted, replaced by EC 3.4.21.122	
3.4.21.61	Kexin	-	
3.4.21.B61	transmembrane protease serine 11D	preliminary BRENDA-supplied EC number	
3.4.21.62	Subtilisin	-	
3.4.21.63	Oryzin	-	
3.4.21.64	peptidase K	-	
3.4.21.65	Thermomycolin	-	
3.4.21.66	Thermitase	-	
3.4.21.67	Endopeptidase So	-	
3.4.21.68	t-Plasminogen activator	-	
3.4.21.69	Protein C (activated)	-	
3.4.21.70	Pancreatic endopeptidase E	-	
3.4.21.71	Pancreatic elastase II	-	
3.4.21.72	IgA-specific serine endopeptidase	-	
3.4.21.73	u-Plasminogen activator	-	
3.4.21.74	venombin A	-	
3.4.21.75	Furin	-	
3.4.21.76	Myeloblastin	-	
3.4.21.77	semenogelase	-	
3.4.21.78	granzyme A	-	
3.4.21.79	granzyme B	-	
3.4.21.80	Streptogrisin A	-	
3.4.21.81	Streptogrisin B	-	
3.4.21.82	Glutamyl endopeptidase II	-	
3.4.21.83	Oligopeptidase B	-	
3.4.21.84	limulus clotting factor C	-	
3.4.21.85	limulus clotting factor B	-	
3.4.21.86	Limulus clotting enzyme	-	
3.4.21.87	omptin	transferred to EC 3.4.23.49	
3.4.21.88	Repressor LexA	-	
3.4.21.89	Signal peptidase I	-	
3.4.21.90	Togavirin	-	
3.4.21.91	Flavivirin	-	
3.4.21.92	Endopeptidase Clp	-	
3.4.21.93	Proprotein convertase 1	-	
3.4.21.94	proprotein convertase 2	-	
3.4.21.95	Snake venom factor V activator	-	
3.4.21.96	Lactocepin	-	
3.4.21.97	assemblin	-	
3.4.21.98	hepacivirin	-	
3.4.21.99	spermosin	-	
3.4.21.100	sedolisin	-	
3.4.21.101	xanthomonalisin	-	
3.4.21.102	C-terminal processing peptidase	-	
3.4.21.103	physarolisin	-	
3.4.21.104	mannan-binding lectin-associated serine protease-2	-	
3.4.21.105	rhomboid protease	-	
3.4.21.106	hepsin	-	
3.4.21.107	peptidase Do	-	
3.4.21.108	HtrA2 peptidase	-	
3.4.21.109	matriptase	-	
3.4.21.110	C5a peptidase	-	
3.4.21.111	aqualysin 1	-	
3.4.21.112	site-1 protease	-	
3.4.21.113	pestivirus NS3 polyprotein peptidase	-	
3.4.21.114	equine arterivirus serine peptidase	-	
3.4.21.115	infectious pancreatic necrosis birnavirus Vp4 peptidase	-	
3.4.21.116	SpoIVB peptidase	-	
3.4.21.117	stratum corneum chymotryptic enzyme	-	
3.4.21.118	kallikrein 8	-	
3.4.21.119	kallikrein 13	-	
3.4.21.120	oviductin	-	
3.4.21.121	Lys-Lys/Arg-Xaa endopeptidase	-	
3.4.21.122	transmembrane protease serine 2	-	
3.4.22.1	cathepsin B	-	
3.4.22.B1	vignain	preliminary BRENDA-supplied EC number	
3.4.22.2	papain	-	
3.4.22.3	ficain	-	
3.4.22.4	bromelain (stem)	transferred to EC 3.4.22.32, EC  3.4.22.33	
3.4.22.5	bromelain (juice)	transferred to EC 3.4.22.33	
3.4.22.B5	CPB protease	preliminary BRENDA-supplied EC number	
3.4.22.6	chymopapain	-	
3.4.22.B6	cathepsin B-like protease	preliminary BRENDA-supplied EC number	
3.4.22.7	asclepain	-	
3.4.22.8	clostripain	-	
3.4.22.B8	Tpr proteinase (Porphyromonas gingivalis)	preliminary BRENDA-supplied EC number	
3.4.22.9	yeast proteinase B	transferred to EC 3.4.21.48	
3.4.22.10	streptopain	-	
3.4.22.11	insulinase	transferred to EC 3.4.99.45	
3.4.22.12	gamma-glutamyl hydrolase	transferred to EC 3.4.19.9	
3.4.22.13	staphylococcal cysteine proteinase	deleted	
3.4.22.14	actinidain	-	
3.4.22.B14	papain-like proteinase 1	preliminary BRENDA-supplied EC number	
3.4.22.15	cathepsin L	-	
3.4.22.B15	rabbit hemorrhagic disease virus 3C-like protease	preliminary BRENDA-supplied EC number	
3.4.22.16	cathepsin H	-	
3.4.22.17	calpain	transferred to EC 3.4.22.52 and EC 3.4.22.53	
3.4.22.18	prolyl endopeptidase (thiol-dependent)	transferred to EC 3.4.21.26	
3.4.22.19	endo-oligopeptidase	transferred to EC 3.4.24.15	
3.4.22.B19	YopJ protease	preliminary BRENDA-supplied EC number	
3.4.22.20	dinorphin-converting enzyme	deleted	
3.4.22.B20	PfpI endopeptidase	preliminary BRENDA-supplied EC number	
3.4.22.21	yeast cysteine proteinase E	transferred to EC 3.4.99.46	
3.4.22.22	yeast cysteine proteinase D	transferred to EC 3.4.24.37	
3.4.22.23	yeast cysteine proteinase F	transferred to EC 3.4.21.61	
3.4.22.24	cathepsin T	-	
3.4.22.B24	calpain 4	preliminary BRENDA-supplied EC number	
3.4.22.25	glycyl endopeptidase	-	
3.4.22.B25	calpain 5	preliminary BRENDA-supplied EC number	
3.4.22.26	cancer procoagulant	-	
3.4.22.B26	calpain 6	preliminary BRENDA-supplied EC number	
3.4.22.27	cathepsin S	-	
3.4.22.B27	calpain 7	preliminary BRENDA-supplied EC number	
3.4.22.28	picornain 3C	-	
3.4.22.B28	calpain 8	preliminary BRENDA-supplied EC number	
3.4.22.29	picornain 2A	-	
3.4.22.B29	calpain 9	preliminary BRENDA-supplied EC number	
3.4.22.30	Caricain	-	
3.4.22.B30	calpain 10	preliminary BRENDA-supplied EC number	
3.4.22.31	Ananain	-	
3.4.22.B31	calpain 11	preliminary BRENDA-supplied EC number	
3.4.22.32	Stem bromelain	-	
3.4.22.B32	calpain 12	preliminary BRENDA-supplied EC number	
3.4.22.33	Fruit bromelain	-	
3.4.22.34	Legumain	-	
3.4.22.35	Histolysain	-	
3.4.22.B35	calpain 15	preliminary BRENDA-supplied EC number	
3.4.22.36	caspase-1	-	
3.4.22.B36	calpain A	preliminary BRENDA-supplied EC number	
3.4.22.37	gingipain R	-	
3.4.22.B37	calpain B	preliminary BRENDA-supplied EC number	
3.4.22.38	cathepsin K	-	
3.4.22.B38	calpain C	preliminary BRENDA-supplied EC number	
3.4.22.39	adenain	-	
3.4.22.40	bleomycin hydrolase	-	
3.4.22.41	cathepsin F	-	
3.4.22.42	cathepsin O	-	
3.4.22.43	cathepsin V	-	
3.4.22.44	nuclear-inclusion-a endopeptidase	-	
3.4.22.45	helper-component proteinase	-	
3.4.22.46	L-peptidase	-	
3.4.22.47	gingipain K	-	
3.4.22.B47	legume cysteine endopeptidase	preliminary BRENDA-supplied EC number	
3.4.22.48	staphopain	-	
3.4.22.49	separase	-	
3.4.22.B49	cathepsin L1	preliminary BRENDA-supplied EC number	
3.4.22.50	V-cath endopeptidase	-	
3.4.22.B50	papain-like proteinase 2	preliminary BRENDA-supplied EC number	
3.4.22.51	cruzipain	-	
3.4.22.52	calpain-1	-	
3.4.22.53	calpain-2	-	
3.4.22.54	calpain-3	-	
3.4.22.55	caspase-2	-	
3.4.22.56	caspase-3	-	
3.4.22.57	caspase-4	-	
3.4.22.58	caspase-5	-	
3.4.22.59	caspase-6	-	
3.4.22.60	caspase-7	-	
3.4.22.B60	cathepsin L2	preliminary BRENDA-supplied EC number	
3.4.22.61	caspase-8	-	
3.4.22.B61	cathepsin L5	preliminary BRENDA-supplied EC number	
3.4.22.62	caspase-9	-	
3.4.22.B62	cathepsin L3	preliminary BRENDA-supplied EC number	
3.4.22.63	caspase-10	-	
3.4.22.B63	sortase C	preliminary BRENDA-supplied EC number	
3.4.22.64	caspase-11	-	
3.4.22.B64	sortase D	preliminary BRENDA-supplied EC number	
3.4.22.65	peptidase 1 (mite)	-	
3.4.22.B65	cathepsin P	preliminary BRENDA-supplied EC number	
3.4.22.66	calicivirin	-	
3.4.22.B66	caspase-12	preliminary BRENDA-supplied EC number	
3.4.22.67	zingipain	-	
3.4.22.B67	Ulp2 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.68	Ulp1 peptidase	-	
3.4.22.B68	EhCP4 proteinase	preliminary BRENDA-supplied EC number	
3.4.22.69	SARS coronavirus main proteinase	-	
3.4.22.B69	falcipain-2	preliminary BRENDA-supplied EC number	
3.4.22.70	sortase A	-	
3.4.22.B70	SENP1 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.71	sortase B	-	
3.4.22.B71	SENP2 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B72	SENP3 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B73	SENP5 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B74	SENP6 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B75	SENP7 peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B76	Allium alpha-fibrinogenase AFTEII	preliminary BRENDA-supplied EC number	
3.4.22.B77	Sulfolobus solfataricus peptidase	preliminary BRENDA-supplied EC number	
3.4.22.B78	endopepidase PH1704	preliminary BRENDA-supplied EC number	
3.4.22.B79	nsP2 protease	preliminary BRENDA-supplied EC number	
3.4.22.B80	SARS-CoV papain-like protease	preliminary BRENDA-supplied EC number	
3.4.23.1	pepsin A	-	
3.4.23.B1	napsin	preliminary BRENDA-supplied EC number	
3.4.23.2	pepsin B	-	
3.4.23.B2	Simian immunodeficiency virus proteinase	preliminary BRENDA-supplied EC number	
3.4.23.3	gastricsin	-	
3.4.23.B3	equine infectious anemia virus proteinase	preliminary BRENDA-supplied EC number	
3.4.23.4	chymosin	-	
3.4.23.B4	Feline immunodeficiency virus protease	preliminary BRENDA-supplied EC number	
3.4.23.5	cathepsin D	-	
3.4.23.B5	murine leukemia virus protease	preliminary BRENDA-supplied EC number	
3.4.23.6	microbial carboxyl proteinases	deleted, included in EC 3.4.23.18-28, EC 3.4.23.30	
3.4.23.B6	Mason-Pfizer monkey virus proteinase	preliminary BRENDA-supplied EC number	
3.4.23.7	Penicillium janthinellum acid proteinase	transferred to EC 3.4.23.20	
3.4.23.8	yeast proteinase A	transferred to EC 3.4.23.25	
3.4.23.B8	human T-cell leukemia virus type 1 protease	preliminary BRENDA-supplied EC number	
3.4.23.9	rhizopus acid proteinase	transferred to EC 3.4.23.21	
3.4.23.B9	bovine leukemia virus protease	preliminary BRENDA-supplied EC number	
3.4.23.10	endothia acid proteinase	transferred to EC 3.4.23.22	
3.4.23.B10	Rous sarcoma virus retropepsin	preliminary BRENDA-supplied EC number	
3.4.23.11	thyroid aspartic proteinase	deleted	
3.4.23.B11	spumapepsin	preliminary BRENDA-supplied EC number	
3.4.23.12	nepenthesin	-	
3.4.23.13	Lotus aspartic proteinase	deleted	
3.4.23.B13	proteinase P15	preliminary BRENDA-supplied EC number	
3.4.23.14	sorghum aspartic proteinase	deleted	
3.4.23.B14	plasmepsin IV	preliminary BRENDA-supplied EC number	
3.4.23.15	renin	-	
3.4.23.16	HIV-1 retropepsin	-	
3.4.23.17	Pro-opiomelanocortin converting enzyme	-	
3.4.23.B17	walleye dermal sarcoma virus proteinase	preliminary BRENDA-supplied EC number	
3.4.23.18	Aspergillopepsin I	-	
3.4.23.B18	mouse mammary tumor virus retropepsin	preliminary BRENDA-supplied EC number	
3.4.23.19	Aspergillopepsin II	-	
3.4.23.B19	plasmepsin V	preliminary BRENDA-supplied EC number	
3.4.23.20	Penicillopepsin	-	
3.4.23.B20	HycD peptidase	preliminary BRENDA-supplied EC number	
3.4.23.21	Rhizopuspepsin	-	
3.4.23.22	Endothiapepsin	-	
3.4.23.23	Mucorpepsin	-	
3.4.23.24	Candidapepsin	-	
3.4.23.B24	signal peptide peptidase	preliminary BRENDA-supplied EC number	
3.4.23.25	saccharopepsin	-	
3.4.23.B25	thermopsin-like protease SSO1175	preliminary BRENDA-supplied EC number	
3.4.23.26	Rhodotorulapepsin	-	
3.4.23.27	physaropepsin	transferred to EC 3.4.21.103	
3.4.23.28	Acrocylindropepsin	-	
3.4.23.29	Polyporopepsin	-	
3.4.23.30	Pycnoporopepsin	-	
3.4.23.31	Scytalidopepsin A	-	
3.4.23.32	Scytalidopepsin B	-	
3.4.23.33	xanthomonapepsin	transferred to EC 3.4.21.101	
3.4.23.34	cathepsin E	-	
3.4.23.35	Barrierpepsin	-	
3.4.23.36	Signal peptidase II	-	
3.4.23.37	pseudomonapepsin	transferred to EC 3.4.21.100	
3.4.23.38	plasmepsin I	-	
3.4.23.39	plasmepsin II	-	
3.4.23.40	Phytepsin	-	
3.4.23.41	yapsin 1	-	
3.4.23.42	thermopsin	-	
3.4.23.43	prepilin peptidase	-	
3.4.23.44	nodavirus endopeptidase	-	
3.4.23.45	memapsin 1	-	
3.4.23.46	memapsin 2	-	
3.4.23.47	HIV-2 retropepsin	-	
3.4.23.48	plasminogen activator Pla	-	
3.4.23.49	omptin	-	
3.4.23.50	human endogenous retrovirus K endopeptidase	-	
3.4.23.51	HycI peptidase	-	
3.4.23.52	preflagellin peptidase	-	
3.4.24.1	atrolysin A	-	
3.4.24.2	Sepia proteinase	deleted	
3.4.24.B2	oligoendopeptidase F	preliminary BRENDA-supplied EC number	
3.4.24.3	microbial collagenase	-	
3.4.24.B3	matrix metalloproteinase-11	preliminary BRENDA-supplied EC number	
3.4.24.4	microbial metalloproteinases	transferred to EC 3.4.24.25-32, EC 3.4.24.39, EC 3.4.24.40	
3.4.24.B4	matrix metalloproteinase-13	preliminary BRENDA-supplied EC number	
3.4.24.5	lens neutral proteinase	deleted, included in EC 3.4.22.17, EC 3.4.25.1	
3.4.24.B5	matrix metalloproteinase-15	preliminary BRENDA-supplied EC number	
3.4.24.6	leucolysin	-	
3.4.24.B6	matrix metalloproteinase-20	preliminary BRENDA-supplied EC number	
3.4.24.7	interstitial collagenase	-	
3.4.24.B7	matrix metalloproteinase-26	preliminary BRENDA-supplied EC number	
3.4.24.8	Achromobacter iophagus collagenase	transferred to EC 3.4.24.3	
3.4.24.B8	ADAM1 endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.9	Trichophyton schoenleinii collagenase	deleted	
3.4.24.B9	ADAM9 endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.10	Trichophyton mentagrophytes keratinase	deleted	
3.4.24.B10	ADAM12 endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.11	neprilysin	-	
3.4.24.B11	ADAMTS1 endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.12	envelysin	-	
3.4.24.B12	ADAMTS5 endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.13	IgA-specific metalloendopeptidase	-	
3.4.24.14	procollagen N-endopeptidase	-	
3.4.24.B14	neprilysin-2	preliminary BRENDA-supplied EC number	
3.4.24.15	thimet oligopeptidase	-	
3.4.24.B15	PHEX peptidase	preliminary BRENDA-supplied EC number	
3.4.24.16	neurolysin	-	
3.4.24.B16	protease lasA	preliminary BRENDA-supplied EC number	
3.4.24.17	stromelysin 1	-	
3.4.24.B17	FtsH endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.18	meprin A	-	
3.4.24.B18	m-AAA protease	preliminary BRENDA-supplied EC number	
3.4.24.19	procollagen C-endopeptidase	-	
3.4.24.B19	i-AAA protease	preliminary BRENDA-supplied EC number	
3.4.24.20	peptidyl-Lys metalloendopeptidase	-	
3.4.24.B20	FtsH protease	preliminary BRENDA-supplied EC number	
3.4.24.21	astacin	-	
3.4.24.22	stromelysin 2	-	
3.4.24.23	matrilysin	-	
3.4.24.B23	stage IV sporulation protein FB	preliminary BRENDA-supplied EC number	
3.4.24.24	gelatinase A	-	
3.4.24.B24	L-alanine-D-glutamate endopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.25	vibriolysin	-	
3.4.24.B25	MAHCE	preliminary BRENDA-supplied EC number	
3.4.24.26	pseudolysin	-	
3.4.24.B26	myroilysin	preliminary BRENDA-supplied EC number	
3.4.24.27	thermolysin	-	
3.4.24.B27	ADAM19	preliminary BRENDA-supplied EC number	
3.4.24.28	bacillolysin	-	
3.4.24.B28	ADAM15	preliminary BRENDA-supplied EC number	
3.4.24.29	aureolysin	-	
3.4.24.B29	Sulfolobus solfataricus metalloendopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.30	coccolysin	-	
3.4.24.B30	aeropyrolysin	preliminary BRENDA-supplied EC number	
3.4.24.31	mycolysin	-	
3.4.24.32	beta-Lytic metalloendopeptidase	-	
3.4.24.33	peptidyl-Asp metalloendopeptidase	-	
3.4.24.B33	Vipera ammodytes ammodytes metalloproteinase VaH3	preliminary BRENDA-supplied EC number	
3.4.24.34	neutrophil collagenase	-	
3.4.24.B34	Vipera ammodytes ammodytes metalloproteinase VaF1	preliminary BRENDA-supplied EC number	
3.4.24.35	gelatinase B	-	
3.4.24.B35	Vipera ammodytes ammodytes metalloproteinase VaH4	preliminary BRENDA-supplied EC number	
3.4.24.36	leishmanolysin	-	
3.4.24.B36	Vipera ammodytes ammodytes metalloproteinase VaH1	preliminary BRENDA-supplied EC number	
3.4.24.37	saccharolysin	-	
3.4.24.B37	mutalysin II	preliminary BRENDA-supplied EC number	
3.4.24.38	gametolysin	-	
3.4.24.B38	ammodytagin	preliminary BRENDA-supplied EC number	
3.4.24.39	deuterolysin	-	
3.4.24.B39	metallo-alpha-fibrinogenase	preliminary BRENDA-supplied EC number	
3.4.24.40	serralysin	-	
3.4.24.B40	ADAM 13 enpopeptidase	preliminary BRENDA-supplied EC number	
3.4.24.41	atrolysin B	-	
3.4.24.42	atrolysin C	-	
3.4.24.43	atroxase	-	
3.4.24.44	atrolysin E	-	
3.4.24.45	atrolysin F	-	
3.4.24.46	adamalysin	-	
3.4.24.47	horrilysin	-	
3.4.24.48	ruberlysin	-	
3.4.24.49	bothropasin	-	
3.4.24.50	bothrolysin	-	
3.4.24.51	ophiolysin	-	
3.4.24.52	trimerelysin I	-	
3.4.24.53	trimerelysin II	-	
3.4.24.54	mucrolysin	-	
3.4.24.55	pitrilysin	-	
3.4.24.56	insulysin	-	
3.4.24.57	O-sialoglycoprotein endopeptidase	-	
3.4.24.58	russellysin	-	
3.4.24.59	mitochondrial intermediate peptidase	-	
3.4.24.60	dactylysin	-	
3.4.24.61	nardilysin	-	
3.4.24.62	magnolysin	-	
3.4.24.63	meprin B	-	
3.4.24.64	mitochondrial processing peptidase	-	
3.4.24.65	macrophage elastase	-	
3.4.24.66	choriolysin L	-	
3.4.24.67	choriolysin H	-	
3.4.24.68	tentoxilysin	-	
3.4.24.69	bontoxilysin	-	
3.4.24.70	oligopeptidase A	-	
3.4.24.71	endothelin-converting enzyme 1	-	
3.4.24.72	fibrolase	-	
3.4.24.73	jararhagin	-	
3.4.24.74	fragilysin	-	
3.4.24.75	lysostaphin	-	
3.4.24.76	flavastacin	-	
3.4.24.77	snapalysin	-	
3.4.24.78	gpr endopeptidase	-	
3.4.24.79	pappalysin-1	-	
3.4.24.80	membrane-type matrix metalloproteinase-1	-	
3.4.24.81	ADAM10 endopeptidase	-	
3.4.24.82	ADAMTS-4 endopeptidase	-	
3.4.24.83	anthrax lethal factor endopeptidase	-	
3.4.24.84	Ste24 endopeptidase	-	
3.4.24.85	S2P endopeptidase	-	
3.4.24.86	ADAM 17 endopeptidase	-	
3.4.24.87	ADAMTS13 endopeptidase	-	
3.4.24.88	desampylase	transferred to EC 3.4.19.15	
3.4.24.89	Pro-Pro endopeptidase	-	
3.4.25.1	proteasome endopeptidase complex	-	
3.4.25.2	HslU-HslV peptidase	-	
3.4.99.1	acrocylindricum proteinase	transferred to EC 3.4.23.28	
3.4.99.B1	RCE1	preliminary BRENDA-supplied EC number	
3.4.99.2	agavain	deleted	
3.4.99.B2	D-aspartyl endopeptidase	preliminary BRENDA-supplied EC number	
3.4.99.3	angiotensinase	deleted	
3.4.99.4	aspartylendopeptidase	transferred to EC 3.4.23.12	
3.4.99.5	Clostridium histolyticum collagenase 2	transferred to EC 3.4.24.3	
3.4.99.6	crayfish low-molecular-weight proteinase	transferred to EC 3.4.24.21	
3.4.99.7	euphorbain	deleted	
3.4.99.8	Gliocladium proteinase	deleted	
3.4.99.9	hurain	deleted	
3.4.99.10	insulinase	transferred to EC 3.4.24.56	
3.4.99.11	Streptomyces alkalophilic keratinase	deleted	
3.4.99.12	Trichophyton mentagrophytes keratinase	deleted	
3.4.99.13	beta-lytic proteinase (Mycobacterium sorangium)	transferred to EC 3.4.24.32	
3.4.99.14	mexicanain	deleted	
3.4.99.15	Paecilomyces proteinase	deleted	
3.4.99.16	Penicillium notatum extracellular proteinase	deleted	
3.4.99.17	peptidoglycan endopeptidase	deleted	
3.4.99.18	pinguinain	deleted	
3.4.99.19	renin	transferred to EC 3.4.23.15	
3.4.99.20	scopulariopsis proteinase	deleted	
3.4.99.21	solanain	deleted	
3.4.99.22	staphylokinase	transferred to EC 3.4.24.29	
3.4.99.23	tabernamontanain	deleted	
3.4.99.24	Tenebrio alpha-proteinase	deleted	
3.4.99.25	trametes acid proteinase	transferred to EC 3.4.23.21	
3.4.99.26	urokinase	transferred to EC 3.4.21.7, EC 3.4.21.68	
3.4.99.27	Echis carinatus prothrombin-activating proteinase	deleted	
3.4.99.28	Oxyuranus scutellatus prothrombin-activating proteinase	transferred to EC 3.4.21.60	
3.4.99.29	Myxobacter AL-1 proteinase I	deleted	
3.4.99.30	Myxobacter AL-1 proteinase II	transferred to EC 3.4.24.20	
3.4.99.31	Tissue endopeptidase degrading collagenase synthetic substrate	transferred to EC 3.4.24.15	
3.4.99.32	Armillaria mellea neutral proteinase	transferred to EC 3.4.24.20	
3.4.99.33	cathepsin R	deleted	
3.4.99.34	mytilidase	deleted	
3.4.99.35	premurein-leader peptidase	transferred to EC 3.4.23.36	
3.4.99.36	leader peptidase	transferred to EC 3.4.21.89	
3.4.99.37	RecA peptidase	deleted	
3.4.99.38	pro-opiomelanotropin-converting proteinase	transferred to EC 3.4.23.17	
3.4.99.39	pseudomurein endopeptidase	deleted	
3.4.99.40	pro-gonadoliberin proteinase	deleted	
3.4.99.41	mitochondrial processing peptidase	transferred to EC 3.4.24.64	
3.4.99.42	leucyllysine endopeptidase	deleted	
3.4.99.43	thermopsin	transferred to EC 3.4.23.42	
3.4.99.44	pitrilysin	transferred to EC 3.4.24.55	
3.4.99.45	insulinase	transferred to EC 3.4.24.56	
3.4.99.46	multicatalytic endopeptidase complex	transferred to EC 3.4.25.1	
3.5.1.1	asparaginase	-	
3.5.1.2	glutaminase	-	
3.5.1.3	omega-amidase	-	
3.5.1.4	amidase	-	
3.5.1.B4	acetylcitrulline deacetylase	preliminary BRENDA-supplied EC number	
3.5.1.5	urease	-	
3.5.1.6	beta-ureidopropionase	-	
3.5.1.7	ureidosuccinase	-	
3.5.1.8	formylaspartate deformylase	-	
3.5.1.9	arylformamidase	-	
3.5.1.10	formyltetrahydrofolate deformylase	-	
3.5.1.11	penicillin amidase	-	
3.5.1.12	biotinidase	-	
3.5.1.13	aryl-acylamidase	-	
3.5.1.B13	4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase	preliminary BRENDA-supplied EC number	
3.5.1.14	N-acyl-aliphatic-L-amino acid amidohydrolase	-	
3.5.1.15	aspartoacylase	-	
3.5.1.B15	pyrazinamidase	preliminary BRENDA-supplied EC number	
3.5.1.16	acetylornithine deacetylase	-	
3.5.1.17	acyl-lysine deacylase	-	
3.5.1.18	succinyl-diaminopimelate desuccinylase	-	
3.5.1.B18	4-aminobenzoylglutamate hydrolase	preliminary BRENDA-supplied EC number	
3.5.1.19	nicotinamidase	-	
3.5.1.20	citrullinase	-	
3.5.1.21	N-acetyl-beta-alanine deacetylase	-	
3.5.1.22	pantothenase	-	
3.5.1.23	ceramidase	-	
3.5.1.24	choloylglycine hydrolase	-	
3.5.1.25	N-acetylglucosamine-6-phosphate deacetylase	-	
3.5.1.26	N4-(beta-N-acetylglucosaminyl)-L-asparaginase	-	
3.5.1.27	N-formylmethionylaminoacyl-tRNA deformylase	deleted, now covered by EC 3.5.1.88, peptide deformylase	
3.5.1.28	N-acetylmuramoyl-L-alanine amidase	-	
3.5.1.29	2-(acetamidomethylene)succinate hydrolase	-	
3.5.1.30	5-aminopentanamidase	-	
3.5.1.31	formylmethionine deformylase	-	
3.5.1.32	hippurate hydrolase	-	
3.5.1.33	N-acetylglucosamine deacetylase	-	
3.5.1.34	acetylhistidine deacetylase	deleted, identical to EC 3.4.13.5	
3.5.1.35	D-glutaminase	-	
3.5.1.36	N-methyl-2-oxoglutaramate hydrolase	-	
3.5.1.37	4-L-aspartylglycosylamine amidohydrolase	deleted, identical to EC 3.5.1.26	
3.5.1.38	glutamin-(asparagin-)ase	-	
3.5.1.39	alkylamidase	-	
3.5.1.40	acylagmatine amidase	-	
3.5.1.41	chitin deacetylase	-	
3.5.1.42	nicotinamide-nucleotide amidase	-	
3.5.1.43	peptidyl-glutaminase	-	
3.5.1.44	protein-glutamine glutaminase	-	
3.5.1.45	urease (ATP-hydrolysing)	transferred to EC 6.3.4.6	
3.5.1.46	6-aminohexanoate-oligomer exohydrolase	-	
3.5.1.47	N-acetyldiaminopimelate deacetylase	-	
3.5.1.48	acetylspermidine deacetylase	-	
3.5.1.49	formamidase	-	
3.5.1.50	pentanamidase	-	
3.5.1.51	4-acetamidobutyryl-CoA deacetylase	-	
3.5.1.52	peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase	-	
3.5.1.53	N-carbamoylputrescine amidase	-	
3.5.1.54	allophanate hydrolase	-	
3.5.1.55	long-chain-fatty-acyl-glutamate deacylase	-	
3.5.1.56	N,N-dimethylformamidase	-	
3.5.1.57	tryptophanamidase	-	
3.5.1.58	N-benzyloxycarbonylglycine hydrolase	-	
3.5.1.59	N-carbamoylsarcosine amidase	-	
3.5.1.60	N-(long-chain-acyl)ethanolamine deacylase	-	
3.5.1.61	mimosinase	-	
3.5.1.62	acetylputrescine deacetylase	-	
3.5.1.63	4-acetamidobutyrate deacetylase	-	
3.5.1.64	Nalpha-benzyloxycarbonylleucine hydrolase	-	
3.5.1.65	theanine hydrolase	-	
3.5.1.66	2-(hydroxymethyl)-3-(acetamidomethylene)succinate hydrolase	-	
3.5.1.67	4-methyleneglutaminase	-	
3.5.1.68	N-formylglutamate deformylase	-	
3.5.1.69	glycosphingolipid deacylase	-	
3.5.1.70	aculeacin-A deacylase	-	
3.5.1.71	N-feruloylglycine deacylase	-	
3.5.1.72	D-benzoylarginine-4-nitroanilide amidase	-	
3.5.1.73	carnitinamidase	-	
3.5.1.74	chenodeoxycholoyltaurine hydrolase	-	
3.5.1.75	urethanase	-	
3.5.1.76	Arylalkyl acylamidase	-	
3.5.1.77	N-carbamoyl-D-amino-acid hydrolase	-	
3.5.1.78	Glutathionylspermidine amidase	-	
3.5.1.79	Phthalyl amidase	-	
3.5.1.80	N-acetylgalactosamine-6-phosphate deacetylase	deleted, identical to EC 3.5.1.25	
3.5.1.81	N-Acyl-D-amino-acid deacylase	-	
3.5.1.82	N-acyl-D-glutamate deacylase	-	
3.5.1.83	N-Acyl-D-aspartate deacylase	-	
3.5.1.84	biuret amidohydrolase	-	
3.5.1.85	(S)-N-acetyl-1-phenylethylamine hydrolase	-	
3.5.1.86	mandelamide amidase	-	
3.5.1.87	N-carbamoyl-L-amino-acid hydrolase	-	
3.5.1.88	peptide deformylase	-	
3.5.1.89	N-acetylglucosaminylphosphatidylinositol deacetylase	-	
3.5.1.90	adenosylcobinamide hydrolase	-	
3.5.1.91	N-substituted formamide deformylase	-	
3.5.1.92	pantetheine hydrolase	-	
3.5.1.93	glutaryl-7-aminocephalosporanic-acid acylase	-	
3.5.1.94	gamma-glutamyl-gamma-aminobutyrate hydrolase	-	
3.5.1.95	N-malonylurea hydrolase	-	
3.5.1.96	succinylglutamate desuccinylase	-	
3.5.1.97	acyl-homoserine-lactone acylase	-	
3.5.1.98	histone deacetylase	-	
3.5.1.99	fatty acid amide hydrolase	-	
3.5.1.100	(R)-amidase	-	
3.5.1.101	L-proline amide hydrolase	-	
3.5.1.102	2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase	-	
3.5.1.103	N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase	-	
3.5.1.104	peptidoglycan-N-acetylglucosamine deacetylase	-	
3.5.1.105	chitin disaccharide deacetylase	-	
3.5.1.106	N-formylmaleamate deformylase	-	
3.5.1.107	maleamate amidohydrolase	-	
3.5.1.108	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-	
3.5.1.109	sphingomyelin deacylase	-	
3.5.1.110	ureidoacrylate amidohydrolase	-	
3.5.1.111	2-oxoglutaramate amidase	-	
3.5.1.112	2'-N-acetylparomamine deacetylase	-	
3.5.1.113	2'''-acetyl-6'''-hydroxyneomycin C deacetylase	-	
3.5.1.114	N-acyl-aromatic-L-amino acid amidohydrolase	-	
3.5.1.115	mycothiol S-conjugate amidase	-	
3.5.1.116	ureidoglycolate amidohydrolase	-	
3.5.1.117	6-aminohexanoate-oligomer endohydrolase	-	
3.5.1.118	gamma-glutamyl hercynylcysteine S-oxide hydrolase	-	
3.5.1.119	Pup amidohydrolase	-	
3.5.1.120	2-aminomuconate deaminase (2-hydroxymuconate-forming)	transferred to EC 3.5.99.11	
3.5.1.121	protein N-terminal asparagine amidohydrolase	-	
3.5.1.122	protein N-terminal glutamine amidohydrolase	-	
3.5.1.123	gamma-glutamylanilide hydrolase	-	
3.5.1.124	protein deglycase	-	
3.5.1.125	N2-acetyl-L-2,4-diaminobutanoate deacetylase	-	
3.5.1.126	oxamate amidohydrolase	-	
3.5.1.127	jasmonoyl-L-amino acid hydrolase	-	
3.5.1.128	deaminated glutathione amidase	-	
3.5.1.129	N5-(cytidine 5'-diphosphoramidyl)-L-glutamine hydrolase	-	
3.5.1.130	[amino group carrier protein]-lysine hydrolase	-	
3.5.1.131	1-carboxybiuret hydrolase	-	
3.5.1.132	[amino group carrier protein]-ornithine hydrolase	-	
3.5.1.133	Nalpha-acyl-L-glutamine aminoacylase	-	
3.5.1.134	(indol-3-yl)acetyl-L-aspartate hydrolase	-	
3.5.1.135	N4-acetylcytidine amidohydrolase	-	
3.5.1.136	N,N'-diacetylchitobiose non-reducing end deacetylase	-	
3.5.1.137	N-methylcarbamate hydrolase	-	
3.5.2.1	barbiturase	-	
3.5.2.2	dihydropyrimidinase	-	
3.5.2.B2	(+)-gamma-lactamase	preliminary BRENDA-supplied EC number	
3.5.2.3	dihydroorotase	-	
3.5.2.B3	(-)-gamma-lactamase	preliminary BRENDA-supplied EC number	
3.5.2.4	carboxymethylhydantoinase	-	
3.5.2.5	allantoinase	-	
3.5.2.6	beta-lactamase	-	
3.5.2.7	imidazolonepropionase	-	
3.5.2.8	cephalosporinase	deleted, included in EC 3.5.2.6	
3.5.2.9	5-oxoprolinase (ATP-hydrolysing)	-	
3.5.2.10	creatininase	-	
3.5.2.11	L-lysine-lactamase	-	
3.5.2.12	6-aminohexanoate-cyclic-dimer hydrolase	-	
3.5.2.13	2,5-dioxopiperazine hydrolase	-	
3.5.2.14	N-methylhydantoinase (ATP-hydrolysing)	-	
3.5.2.15	cyanuric acid amidohydrolase	-	
3.5.2.16	maleimide hydrolase	-	
3.5.2.17	hydroxyisourate hydrolase	-	
3.5.2.18	enamidase	-	
3.5.2.19	streptothricin hydrolase	-	
3.5.2.20	isatin hydrolase	-	
3.5.3.1	arginase	-	
3.5.3.2	guanidinoacetase	-	
3.5.3.3	creatinase	-	
3.5.3.4	allantoicase	-	
3.5.3.5	formimidoylaspartate deiminase	-	
3.5.3.6	arginine deiminase	-	
3.5.3.7	guanidinobutyrase	-	
3.5.3.8	formimidoylglutamase	-	
3.5.3.9	allantoate deiminase	-	
3.5.3.10	D-arginase	-	
3.5.3.11	agmatinase	-	
3.5.3.12	agmatine deiminase	-	
3.5.3.13	formimidoylglutamate deiminase	-	
3.5.3.14	amidinoaspartase	-	
3.5.3.15	protein-arginine deiminase	-	
3.5.3.16	methylguanidinase	-	
3.5.3.17	Guanidinopropionase	-	
3.5.3.18	dimethylargininase	-	
3.5.3.19	ureidoglycolate hydrolase	transferred to EC 3.5.1.116, ureidoglycolate amidohydrolase	
3.5.3.20	diguanidinobutanase	-	
3.5.3.21	methylenediurea deaminase	-	
3.5.3.22	proclavaminate amidinohydrolase	-	
3.5.3.23	N-succinylarginine dihydrolase	-	
3.5.3.24	N1-aminopropylagmatine ureohydrolase	-	
3.5.3.25	Nomega-hydroxy-L-arginine amidinohydrolase	-	
3.5.3.26	(S)-ureidoglycine aminohydrolase	-	
3.5.4.1	cytosine deaminase	-	
3.5.4.2	adenine deaminase	-	
3.5.4.3	guanine deaminase	-	
3.5.4.4	adenosine deaminase	-	
3.5.4.5	cytidine deaminase	-	
3.5.4.6	AMP deaminase	-	
3.5.4.7	ADP deaminase	-	
3.5.4.8	aminoimidazolase	-	
3.5.4.9	methenyltetrahydrofolate cyclohydrolase	-	
3.5.4.B9	cytosine deaminase APOBEC3G	preliminary BRENDA-supplied EC number	
3.5.4.10	IMP cyclohydrolase	-	
3.5.4.11	pterin deaminase	-	
3.5.4.12	dCMP deaminase	-	
3.5.4.13	dCTP deaminase	-	
3.5.4.14	deoxycytidine deaminase	transferred. Now EC 3.5.4.5	
3.5.4.15	guanosine deaminase	-	
3.5.4.16	GTP cyclohydrolase I	-	
3.5.4.17	adenosine-phosphate deaminase	-	
3.5.4.18	ATP deaminase	-	
3.5.4.19	phosphoribosyl-AMP cyclohydrolase	-	
3.5.4.20	pyrithiamine deaminase	-	
3.5.4.21	creatinine deaminase	-	
3.5.4.22	1-pyrroline-4-hydroxy-2-carboxylate deaminase	-	
3.5.4.23	blasticidin-S deaminase	-	
3.5.4.24	sepiapterin deaminase	-	
3.5.4.25	GTP cyclohydrolase II	-	
3.5.4.26	diaminohydroxyphosphoribosylaminopyrimidine deaminase	-	
3.5.4.27	methenyltetrahydromethanopterin cyclohydrolase	-	
3.5.4.28	S-adenosylhomocysteine deaminase	-	
3.5.4.29	GTP cyclohydrolase IIa	-	
3.5.4.30	dCTP deaminase (dUMP-forming)	-	
3.5.4.31	S-methyl-5'-thioadenosine deaminase	-	
3.5.4.32	8-oxoguanine deaminase	-	
3.5.4.33	tRNA(adenine34) deaminase	-	
3.5.4.34	tRNAAla(adenine37) deaminase	-	
3.5.4.35	tRNA(cytosine8) deaminase	-	
3.5.4.36	mRNA(cytosine6666) deaminase	-	
3.5.4.37	double-stranded RNA adenine deaminase	-	
3.5.4.38	single-stranded DNA cytosine deaminase	-	
3.5.4.39	GTP cyclohydrolase IV	-	
3.5.4.40	aminodeoxyfutalosine deaminase	-	
3.5.4.41	5'-deoxyadenosine deaminase	-	
3.5.4.42	N-isopropylammelide isopropylaminohydrolase	-	
3.5.4.43	hydroxydechloroatrazine ethylaminohydrolase	-	
3.5.4.44	ectoine hydrolase	-	
3.5.4.45	melamine deaminase	-	
3.5.4.46	cAMP deaminase	-	
3.5.5.1	nitrilase	-	
3.5.5.2	ricinine nitrilase	-	
3.5.5.3	cyanate hydrolase	transferred to EC 4.3.99.1	
3.5.5.4	cyanoalanine nitrilase	-	
3.5.5.5	Arylacetonitrilase	-	
3.5.5.6	bromoxynil nitrilase	-	
3.5.5.7	Aliphatic nitrilase	-	
3.5.5.8	thiocyanate hydrolase	-	
3.5.99.1	riboflavinase	-	
3.5.99.2	aminopyrimidine aminohydrolase	-	
3.5.99.3	hydroxydechloroatrazine ethylaminohydrolase	transferred to EC 3.5.4.43	
3.5.99.4	N-isopropylammelide isopropylaminohydrolase	transferred to EC 3.5.4.42	
3.5.99.5	2-aminomuconate deaminase	-	
3.5.99.6	glucosamine-6-phosphate deaminase	-	
3.5.99.7	1-aminocyclopropane-1-carboxylate deaminase	-	
3.5.99.8	5-nitroanthranilic acid aminohydrolase	-	
3.5.99.9	2-nitroimidazole nitrohydrolase	-	
3.5.99.10	2-iminobutanoate/2-iminopropanoate deaminase	-	
3.5.99.11	2-aminomuconate deaminase (2-hydroxymuconate-forming)	-	
3.6.1.1	inorganic diphosphatase	-	
3.6.1.2	trimetaphosphatase	-	
3.6.1.3	adenosinetriphosphatase	deleted, enzymes previously listed under this number are now listed separately under EC 5.6 and EC 7	
3.6.1.4	adenosinetriphosphatase (Mg-activated)	deleted, included in EC 3.6.1.3	
3.6.1.5	apyrase	-	
3.6.1.6	nucleoside diphosphate phosphatase	-	
3.6.1.7	acylphosphatase	-	
3.6.1.8	ATP diphosphatase	-	
3.6.1.9	nucleotide diphosphatase	-	
3.6.1.10	endopolyphosphatase	-	
3.6.1.11	exopolyphosphatase	-	
3.6.1.B11	multiple site diadenosine 5',5'''-P1,P6-hexaphosphate hydrolase	preliminary BRENDA-supplied EC number	
3.6.1.12	dCTP diphosphatase	-	
3.6.1.13	ADP-ribose diphosphatase	-	
3.6.1.14	adenosine-tetraphosphatase	-	
3.6.1.15	nucleoside-triphosphate phosphatase	-	
3.6.1.16	CDP-glycerol diphosphatase	-	
3.6.1.B16	guanosine-3',5'-bis(diphosphate) bisphosphatase	preliminary BRENDA-supplied Ec number	
3.6.1.17	bis(5'-nucleosyl)-tetraphosphatase (asymmetrical)	-	
3.6.1.B17	ATP-independent RNA helicase	preliminary BRENDA-supplied EC number	
3.6.1.18	FAD diphosphatase	-	
3.6.1.B18	inositol diphosphate 1-phosphatase	preliminary BRENDA-supplied EC number	
3.6.1.19	nucleoside-triphosphate diphosphatase	deleted, now included with EC 3.6.1.9	
3.6.1.20	5'-acylphosphoadenosine hydrolase	-	
3.6.1.21	ADP-sugar diphosphatase	-	
3.6.1.22	NAD+ diphosphatase	-	
3.6.1.23	dUTP diphosphatase	-	
3.6.1.24	nucleoside phosphoacylhydrolase	-	
3.6.1.25	triphosphatase	-	
3.6.1.26	CDP-diacylglycerol diphosphatase	-	
3.6.1.27	undecaprenyl-diphosphate phosphatase	-	
3.6.1.28	thiamine-triphosphatase	-	
3.6.1.29	bis(5'-adenosyl)-triphosphatase	-	
3.6.1.30	m7G(5')pppN diphosphatase	deleted, now covered by EC 3.6.1.59 [m7GpppX diphosphatase] and EC 3.6.1.62 [m7GpppN-mRNA hydrolase]	
3.6.1.31	phosphoribosyl-ATP diphosphatase	-	
3.6.1.32	myosin ATPase	transferred to EC 3.6.4.1	
3.6.1.33	dynein ATPase	transferred to EC 3.6.4.2	
3.6.1.34	H+-transporting ATP synthase	transferred to  EC 7.1.2.2, H+-transporting two-sector ATPase	
3.6.1.35	H+-transporting ATPase	transferred to EC 3.6.3.6	
3.6.1.36	H+/K+ exchanging ATPase	transferred to EC 3.6.3.10	
3.6.1.37	Na+/K+ exchanging ATPase	transferred to EC 3.6.3.9	
3.6.1.38	Ca2+-transporting ATPase	transferred to EC 3.6.3.8	
3.6.1.39	thymidine-triphosphatase	-	
3.6.1.40	guanosine-5'-triphosphate,3'-diphosphate phosphatase	-	
3.6.1.41	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	-	
3.6.1.42	guanosine-diphosphatase	-	
3.6.1.43	dolichyldiphosphatase	-	
3.6.1.44	oligosaccharide-diphosphodolichol diphosphatase	-	
3.6.1.45	UDP-sugar diphosphatase	-	
3.6.1.46	heterotrimeric G-protein GTPase	transferred to EC 3.6.5.1	
3.6.1.47	small monomeric GTPase	transferred to EC 3.6.5.2	
3.6.1.48	protein-synthesizing GTPase	transferred to EC 3.6.5.3	
3.6.1.49	signal-recognition-particle GTPase	transferred to EC 3.6.5.4	
3.6.1.50	dynamin GTPase	transferred to EC 3.6.5.5	
3.6.1.51	tubulin GTPase	transferred to EC 3.6.5.6	
3.6.1.52	diphosphoinositol-polyphosphate diphosphatase	-	
3.6.1.53	Mn2+-dependent ADP-ribose/CDP-alcohol diphosphatase	-	
3.6.1.54	UDP-2,3-diacylglucosamine diphosphatase	-	
3.6.1.55	8-oxo-dGTP diphosphatase	-	
3.6.1.56	2-hydroxy-dATP diphosphatase	-	
3.6.1.57	UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase	-	
3.6.1.58	8-oxo-dGDP phosphatase	-	
3.6.1.59	5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase	-	
3.6.1.60	diadenosine hexaphosphate hydrolase (AMP-forming)	-	
3.6.1.61	diadenosine hexaphosphate hydrolase (ATP-forming)	-	
3.6.1.62	5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase	-	
3.6.1.63	alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase	-	
3.6.1.64	inosine diphosphate phosphatase	-	
3.6.1.65	(d)CTP diphosphatase	-	
3.6.1.66	XTP/dITP diphosphatase	-	
3.6.1.67	dihydroneopterin triphosphate diphosphatase	-	
3.6.1.68	geranyl diphosphate phosphohydrolase	-	
3.6.1.69	8-oxo-(d)GTP phosphatase	-	
3.6.1.70	guanosine-5'-diphospho-5'-[DNA] diphosphatase	-	
3.6.1.71	adenosine-5'-diphospho-5'-[DNA] diphosphatase	-	
3.6.1.72	DNA-3'-diphospho-5'-guanosine diphosphatase	-	
3.6.1.73	inosine/xanthosine triphosphatase	-	
3.6.1.74	mRNA 5'-phosphatase	-	
3.6.1.75	diacylglycerol diphosphate phosphatase	-	
3.6.2.1	adenylylsulfatase	-	
3.6.2.2	phosphoadenylylsulfatase	-	
3.6.3.1	phospholipid-translocating ATPase	transferred to EC 7.6.2.1	
3.6.3.2	Mg2+-importing ATPase	transferred to EC 7.2.2.14	
3.6.3.3	Cd2+-exporting ATPase	transferred to EC 7.2.2.21	
3.6.3.4	Cu2+-exporting ATPase	transferred to EC 7.2.2.9	
3.6.3.5	Zn2+-exporting ATPase	transferred to EC 7.2.2.12	
3.6.3.6	H+-exporting ATPase	transferred to EC 7.1.2.1	
3.6.3.7	Na+-exporting ATPase	transferred to EC 7.2.2.3	
3.6.3.8	Ca2+-transporting ATPase	transferred to EC 7.2.2.10	
3.6.3.9	Na+/K+-exchanging ATPase	transferred to EC 7.2.2.13	
3.6.3.10	H+/K+-exchanging ATPase	transferred to EC 7.2.2.19	
3.6.3.11	Cl--transporting ATPase	deleted, the activity was only ever studied in crude extracts, and is an artifact.	
3.6.3.12	K+-transporting ATPase	transferred to EC 7.2.2.6	
3.6.3.13	aminophospholipid-transporting ATPase	deleted, identical to EC 3.6.3.1, phospholipid-translocating ATPase	
3.6.3.14	H+-transporting two-sector ATPase	transferred to EC 7.1.2.2	
3.6.3.15	Na+-transporting two-sector ATPase	transferred to EC 7.2.2.1	
3.6.3.16	arsenite-transporting ATPase	transferred to EC 7.3.2.7	
3.6.3.17	monosaccharide-transporting ATPase	transferred to subgroup EC 7.5.2.	
3.6.3.18	oligosaccharide-transporting ATPase	transferred to EC 7.5.2.2	
3.6.3.19	maltose-transporting ATPase	transferred to EC 7.5.2.1	
3.6.3.20	glycerol-3-phosphate-transporting ATPase	transferred to EC 7.6.2.10	
3.6.3.21	polar-amino-acid-transporting ATPase	transferred to EC 7.4.2.1	
3.6.3.22	nonpolar-amino-acid-transporting ATPase	transferred to EC 7.4.2.2	
3.6.3.23	oligopeptide-transporting ATPase	transferred to EC 7.4.2.6	
3.6.3.24	nickel-transporting ATPase	transferred to EC 7.2.2.11	
3.6.3.25	sulfate-transporting ATPase	transferred to EC 7.3.2.3	
3.6.3.26	nitrate-transporting ATPase	transferred to EC 7.3.2.4	
3.6.3.27	phosphate-transporting ATPase	transferred to EC 7.3.2.1	
3.6.3.28	phosphonate-transporting ATPase	transferred to EC 7.3.2.2	
3.6.3.29	molybdate-transporting ATPase	transferred to EC 7.3.2.5	
3.6.3.30	Fe3+-transporting ATPase	transferred to EC 7.2.2.7	
3.6.3.31	polyamine-transporting ATPase	transferred to EC 7.6.2.11	
3.6.3.32	quaternary-amine-transporting ATPase	transferred to EC 7.6.2.9	
3.6.3.33	vitamin B12-transporting ATPase	transferred to EC 7.6.2.8	
3.6.3.34	iron-chelate-transporting ATPase	transferred to EC 7.2.2.16, EC 7.2.2.17, EC 7.2.2.18	
3.6.3.35	manganese-transporting ATPase	transferred to EC 7.2.2.5	
3.6.3.36	taurine-transporting ATPase	transferred to EC 7.6.2.7	
3.6.3.37	guanine-transporting ATPase	transferred to EC 7.6.2.6	
3.6.3.38	capsular-polysaccharide-transporting ATPase	transferred to EC 7.6.2.12	
3.6.3.39	lipopolysaccharide-transporting ATPase	transferred to EC 7.5.2.5	
3.6.3.40	teichoic-acid-transporting ATPase	transferred to EC 7.5.2.4	
3.6.3.41	heme-transporting ATPase	transferred to EC 7.6.2.5	
3.6.3.42	beta-glucan-transporting ATPase	transferred to EC 7.5.2.3	
3.6.3.43	peptide-transporting ATPase	transferred to EC 7.4.2.5	
3.6.3.44	xenobiotic-transporting ATPase	transferred to EC 7.6.2.2	
3.6.3.45	steroid-transporting ATPase	deleted, now included with EC 3.6.3.44, xenobiotic-transporting ATPase	
3.6.3.46	cadmium-transporting ATPase	transferred to EC 7.2.2.2	
3.6.3.47	fatty-acyl-CoA-transporting ATPase	transferred to EC 7.6.2.4	
3.6.3.48	alpha-factor-transporting ATPase	transferred to EC 7.4.2.7	
3.6.3.49	channel-conductance-controlling ATPase	transferred to EC 5.6.1.6	
3.6.3.50	protein-secreting ATPase	transferred to EC 7.4.2.8	
3.6.3.51	mitochondrial protein-transporting ATPase	transferred to EC 7.4.2.3	
3.6.3.52	chloroplast protein-transporting ATPase	transferred to EC 7.4.2.4	
3.6.3.53	Ag+-exporting ATPase	transferred to EC 7.2.2.15	
3.6.3.54	Cu+-exporting ATPase	transferred to EC 7.2.2.8	
3.6.3.55	tungstate-importing ATPase	transferred to EC 7.3.2.6	
3.6.4.1	myosin ATPase	transferred to EC 5.6.1.8	
3.6.4.B1	kinesin K16	preliminary BRENDA-supplied EC number	
3.6.4.2	dynein ATPase	transferred to EC 5.6.1.2	
3.6.4.3	microtubule-severing ATPase	transferred to EC 5.6.1.1	
3.6.4.4	plus-end-directed kinesin ATPase	transferred to EC 5.6.1.3	
3.6.4.B4	presynaptic-filament-stabilizing ATPase	preliminary BRENDA-supplied EC number	
3.6.4.5	minus-end-directed kinesin ATPase	transferred to EC 5.6.1.4	
3.6.4.6	vesicle-fusing ATPase	-	
3.6.4.B6	archaeal flagellar ATPase	preliminary BRENDA-supplied EC number	
3.6.4.7	peroxisome-assembly ATPase	-	
3.6.4.B7	RadA recombinase	preliminary BRENDA-supplied EC number	
3.6.4.8	proteasome ATPase	transferred to EC 5.6.1.5	
3.6.4.B8	clamp-loader complex	preliminary BRENDA-supplied EC number	
3.6.4.9	chaperonin ATPase	transferred to EC 5.6.1.7	
3.6.4.B9	Rad54 translocase	preliminary BRENDA-supplied EC number	
3.6.4.10	non-chaperonin molecular chaperone ATPase	-	
3.6.4.B10	chaperonin ATPase (protein-folding, protecting from aggregation, protein stabilizing)	preliminary BRENDA-supplied EC number	
3.6.4.11	nucleoplasmin ATPase	deleted. The activity has been shown not to take place.	
3.6.4.B11	chromosome segregation protein SegA	preliminary BRENDA-supplied EC number	
3.6.4.12	DNA helicase	transferred to EC 5.6.2.3 and EC 5.6.2.4	
3.6.4.13	RNA helicase	-	
3.6.5.1	heterotrimeric G-protein GTPase	-	
3.6.5.2	small monomeric GTPase	-	
3.6.5.3	protein-synthesizing GTPase	-	
3.6.5.4	signal-recognition-particle GTPase	-	
3.6.5.5	dynamin GTPase	-	
3.6.5.6	tubulin GTPase	-	
3.7.1.1	oxaloacetase	-	
3.7.1.2	fumarylacetoacetase	-	
3.7.1.3	kynureninase	-	
3.7.1.4	phloretin hydrolase	-	
3.7.1.5	acylpyruvate hydrolase	-	
3.7.1.6	acetylpyruvate hydrolase	-	
3.7.1.7	beta-diketone hydrolase	-	
3.7.1.8	2,6-dioxo-6-phenylhexa-3-enoate hydrolase	-	
3.7.1.9	2-hydroxymuconate-6-semialdehyde hydrolase	-	
3.7.1.10	cyclohexane-1,3-dione hydrolase	-	
3.7.1.11	cyclohexane-1,2-dione hydrolase	-	
3.7.1.12	cobalt-precorrin 5A hydrolase	-	
3.7.1.13	2-hydroxy-6-oxo-6-(2-aminophenyl)hexa-2,4-dienoate hydrolase	-	
3.7.1.14	2-hydroxy-6-oxonona-2,4-dienedioate hydrolase	-	
3.7.1.15	(+)-caryolan-1-ol synthase	transferred. Now EC 4.2.1.138	
3.7.1.16	oxepin-CoA hydrolase	transferred to EC 3.3.2.12	
3.7.1.17	4,5:9,10-diseco-3-hydroxy-5,9,17-trioxoandrosta-1(10),2-diene-4-oate hydrolase	-	
3.7.1.18	6-oxocamphor hydrolase	-	
3.7.1.19	2,6-dihydroxypseudooxynicotine hydrolase	-	
3.7.1.20	3-fumarylpyruvate hydrolase	-	
3.7.1.21	6-oxocyclohex-1-ene-1-carbonyl-CoA hydratase	-	
3.7.1.22	3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (ring-opening)	-	
3.7.1.23	maleylpyruvate hydrolase	-	
3.7.1.24	2,4-diacetylphloroglucinol hydrolase	-	
3.7.1.25	2-hydroxy-6-oxohepta-2,4-dienoate hydrolase	-	
3.7.1.26	2,4-didehydro-3-deoxy-L-rhamnonate hydrolase	-	
3.7.1.27	neryl diphosphate diphosphatase	transferred. Now EC 3.1.7.13	
3.7.1.28	3-oxoisoapionate-4-phosphate transcarboxylase/hydrolase	-	
3.8.1.1	alkylhalidase	deleted, now covered by EC 3.8.1.5, haloalkane dehalogenase	
3.8.1.B1	2-haloacrylate hydratase	preliminary BRENDA-supplied EC number	
3.8.1.2	(S)-2-haloacid dehalogenase	-	
3.8.1.3	haloacetate dehalogenase	-	
3.8.1.4	thyroxine deiodinase	transferred to EC 1.97.1.10	
3.8.1.5	haloalkane dehalogenase	-	
3.8.1.6	4-chlorobenzoate dehalogenase	-	
3.8.1.7	4-chlorobenzoyl-CoA dehalogenase	-	
3.8.1.8	atrazine chlorohydrolase	-	
3.8.1.9	(R)-2-haloacid dehalogenase	-	
3.8.1.10	2-haloacid dehalogenase (configuration-inverting)	-	
3.8.1.11	2-haloacid dehalogenase (configuration-retaining)	-	
3.8.2.1	di-isopropyl-fluorophosphatase	transferred to EC 3.1.8.2	
3.9.1.1	phosphoamidase	-	
3.9.1.2	protein arginine phosphatase	-	
3.9.1.3	phosphohistidine phosphatase	-	
3.10.1.1	N-sulfoglucosamine sulfohydrolase	-	
3.10.1.2	cyclamate sulfohydrolase	-	
3.11.1.1	phosphonoacetaldehyde hydrolase	-	
3.11.1.2	phosphonoacetate hydrolase	-	
3.11.1.3	phosphonopyruvate hydrolase	-	
3.12.1.1	trithionate hydrolase	-	
3.12.1.B1	tetrathionate hydrolase	preliminary BRENDA-supplied EC number	
3.13.1.1	UDP-sulfoquinovose synthase	-	
3.13.1.2	5-deoxyribos-5-ylhomocysteinase	deleted, activity most probably due to EC 4.4.1.21	
3.13.1.3	2'-hydroxybiphenyl-2-sulfinate desulfinase	-	
3.13.1.4	3-sulfinopropanoyl-CoA desulfinase	-	
3.13.1.5	carbon disulfide hydrolase	-	
3.13.1.6	[CysO sulfur-carrier protein]-S-L-cysteine hydrolase	-	
3.13.1.7	carbonyl sulfide hydrolase	-	
3.13.1.8	S-adenosyl-L-methionine hydrolase (adenosine-forming)	transferred, now EC 3.13.2.3	
3.13.1.9	S-inosyl-L-homocysteine hydrolase	-	
3.13.2.1	adenosylhomocysteinase	-	
3.13.2.B1	inosylhomocysteinase	preliminary BRENDA-supplied EC number	
3.13.2.2	S-adenosyl-L-methionine hydrolase (L-homoserine-forming)	-	
3.13.2.3	(R)-S-adenosyl-L-methionine hydrolase (adenosine-forming)	-