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EC 2.3.2.32 Details

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EC number

2.3.2.32

Accepted name

cullin-RING-type E3 NEDD8 transferase

Reaction

[E2 NEDD8-conjugating enzyme]-S-[NEDD8-protein]-yl-L-cysteine + [cullin]-L-lysine = [E2 NEDD8-conjugating enzyme]-L-cysteine + [cullin]-N⁶-[NEDD8-protein]-yl-L-lysine

Other name(s)

RBX1 (gene name)

Systematic name

[E2 NEDD8-conjugating enzyme]-S-[NEDD8-protein]-yl-L-cysteine:[cullin] [NEDD8-protein] transferase (isopeptide bond-forming; RING-type)

Comment

Some RING-type E3 ubiquitin transferase (EC 2.3.2.27) are not able to bind a substrate protein directly. Instead, they form a complex with a cullin scaffold protein and a substrate recognition module, which is named CRL for Cullin-RING-Ligase. The cullin protein needs to be activated by the ubiquitin-like protein NEDD8 in a process known as neddylation. The transfer of NEDD8 from a NEDD8-specific E2 enzyme onto the cullin protein is a secondary function of the RING-type E3 ubiquitin transferase in the CRL complex. The process requires auxiliary factors that belong to the DCN1 (defective in cullin neddylation 1) family.

History

created 2017

EC Tree

1 Oxidoreductases

1.1 Acting on the CH-OH group of donors

1.2 Acting on the aldehyde or oxo group of donors

1.3 Acting on the CH-CH group of donors

1.4 Acting on the CH-NH₂ group of donors

1.5 Acting on the CH-NH group of donors

1.6 Acting on NADH or NADPH

1.7 Acting on other nitrogenous compounds as donors

1.8 Acting on a sulfur group of donors

1.9 Acting on a heme group of donors

1.10 Acting on diphenols and related substances as donors

1.11 Acting on a peroxide as acceptor

1.12 Acting on hydrogen as donor

1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)

1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen

1.15 Acting on superoxide as acceptor

1.16 Oxidizing metal ions

1.17 Acting on CH or CH₂ groups

1.17.1 With NAD⁺ or NADP⁺ as acceptor

1.17.2 With a cytochrome as acceptor

1.17.3 With oxygen as acceptor

1.17.4 With a disulfide as acceptor

1.17.5 With a quinone or similar compound as acceptor

1.17.7 With an iron-sulfur protein as acceptor

1.17.8 With a flavin as acceptor

1.17.9 With a copper protein as acceptor

1.17.98 With other, known, physiological acceptors

1.17.99 With unknown physiological acceptors

1.18 Acting on iron-sulfur proteins as donors

1.19 Acting on reduced flavodoxin as donor

1.20 Acting on phosphorus or arsenic in donors

1.20.1 With NAD⁺ or NADP⁺ as acceptor

1.20.2 With a cytochrome as acceptor

1.20.4 With disulfide as acceptor

1.20.9 With a copper protein as acceptor

1.20.98 With other, known, physiological acceptors

1.20.99 With unknown physiological acceptors

1.21 Catalysing the reaction X-H + Y-H = X-Y

1.22 Acting on halogen in donors

1.23 Reducing C-O-C group as acceptor

1.97 Other oxidoreductases

1.98 Enzymes using H₂ as reductant (deleted subclass)

1.99 Other enzymes using O₂ as oxidant (deleted subclass)

2.1 Transferring one-carbon groups

2.2 Transferring aldehyde or ketonic groups

2.3 Acyltransferases

2.3.1 Transferring groups other than aminoacyl groups

2.3.2 Aminoacyltransferases

2.3.2.1 D-glutamyltransferase

2.3.2.2 γ-glutamyltransferase

2.3.2.3 lysyltransferase

2.3.2.4 γ-glutamylcyclotransferase

2.3.2.5 glutaminyl-peptide cyclotransferase

2.3.2.6 lysine/arginine leucyltransferase

2.3.2.7 aspartyltransferase

2.3.2.8 arginyltransferase

2.3.2.9 agaritine γ-glutamyltransferase

2.3.2.10 UDP-N-acetylmuramoylpentapeptide-lysine N⁶-alanyltransferase

2.3.2.11 alanylphosphatidylglycerol synthase

2.3.2.12 peptidyltransferase

2.3.2.13 protein-glutamine γ-glutamyltransferase

2.3.2.14 D-alanine γ-glutamyltransferase

2.3.2.15 glutathione γ-glutamylcysteinyltransferase

2.3.2.16 lipid II:glycine glycyltransferase

2.3.2.17 N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N⁶-glycyl)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase

2.3.2.18 N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-(N⁶-triglycine)-D-alanyl-D-alanine-diphosphoundecaprenyl-N-acetylglucosamine:glycine glycyltransferase

2.3.2.19 ribostamycin:4-(γ-L-glutamylamino)-(S)-2-hydroxybutanoyl-[BtrI acyl-carrier protein] 4-(γ-L-glutamylamino)-(S)-2-hydroxybutanoate transferase

2.3.2.20 cyclo(L-leucyl-L-phenylalanyl) synthase

2.3.2.21 cyclo(L-tyrosyl-L-tyrosyl) synthase

2.3.2.22 cyclo(L-leucyl-L-leucyl) synthase

2.3.2.23 E2 ubiquitin-conjugating enzyme

2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme

2.3.2.25 N-terminal E2 ubiquitin-conjugating enzyme

2.3.2.26 HECT-type E3 ubiquitin transferase

2.3.2.27 RING-type E3 ubiquitin transferase

2.3.2.28 L-allo-isoleucyltransferase

2.3.2.29 aspartate/glutamate leucyltransferase

2.3.2.30 L-ornithine N^α-acyltransferase

2.3.2.31 RBR-type E3 ubiquitin transferase

2.3.2.32 cullin-RING-type E3 NEDD8 transferase

2.3.2.33 RCR-type E3 ubiquitin transferase

2.3.2.34 E2 NEDD8-conjugating enzyme

2.3.2.35 capsaicin synthase

2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)

2.3.3 Acyl groups converted into alkyl groups on transfer

2.4 Glycosyltransferases

2.5 Transferring alkyl or aryl groups, other than methyl groups

2.6 Transferring nitrogenous groups

2.7 Transferring phosphorus-containing groups

2.8 Transferring sulfur-containing groups

2.9 Transferring selenium-containing groups

2.10 Transferring molybdenum- or tungsten-containing groups

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Release 2023.1 (January 2023)